Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 MTCO1P22-201ENST00000604619 1360 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 MIR1179-201ENST00000408703 91 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 AC069285.2-201ENST00000440210 275 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 RANP8-201ENST00000444720 713 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 AL591363.1-201ENST00000450091 483 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 AC034236.1-201ENST00000469891 373 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 FCF1P3-201ENST00000496394 590 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 BNIP3P41-201ENST00000503774 571 ntBASIC3.79□□□□□ -1.8
CCDC88CQ9P219 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC88CQ9P219 OR4A15-201ENST00000314706 1035 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 RNA5SP119-201ENST00000362715 117 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 RNU6-628P-201ENST00000410675 107 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC093578.1-201ENST00000415219 368 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AL352979.3-201ENST00000553515 247 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AL049634.3-201ENST00000604968 457 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AL354760.1-201ENST00000608357 643 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC097504.1-201ENST00000515103 2415 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 SNORA5A-201ENST00000384111 134 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 MIR23B-201ENST00000384832 97 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 SETP10-201ENST00000424368 814 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 OR8F1P-201ENST00000425243 930 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 HMGB3P22-202ENST00000451823 572 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 RN7SL585P-201ENST00000470538 280 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AP000859.1-201ENST00000525536 307 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 QTRT1P1-201ENST00000604344 1078 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 AL137849.1-201ENST00000604767 169 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 OR8B1P-202ENST00000641132 1178 ntBASIC3.78□□□□□ -1.8
CCDC88CQ9P219 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC88CQ9P219 IQCB2P-201ENST00000401788 1633 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 ZNF285B-201ENST00000561698 1767 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 HMGN2P31-201ENST00000432430 273 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 RPS20P21-201ENST00000466859 343 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC110792.1-201ENST00000491826 472 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AF186190.1-201ENST00000517470 480 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 DDX18P3-201ENST00000404856 2007 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 CASC19-261ENST00000641853 1638 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 RN7SKP202-201ENST00000410439 330 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC004552.1-201ENST00000419089 348 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 RPL7P2-201ENST00000427639 268 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms