Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RNU6-207P-201ENST00000384137 107 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 SNORD65C-201ENST00000390962 71 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RPL22P22-201ENST00000395439 379 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC012519.1-201ENST00000424588 610 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC115285.1-201ENST00000424879 736 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RPL37P1-201ENST00000432310 284 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RPL23AP93-201ENST00000440847 484 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RN7SL354P-201ENST00000469282 294 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PRELID3BP4-201ENST00000515476 571 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AP001781.1-201ENST00000530977 207 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC010735.1-201ENST00000567305 1026 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC023824.3-201ENST00000569003 562 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC126365.2-201ENST00000580630 379 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RN7SL622P-201ENST00000585292 275 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RPL7P50-201ENST00000600588 727 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC069304.3-201ENST00000603938 1084 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC115621.1-201ENST00000604653 858 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AL161616.1-201ENST00000611867 286 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 MIR6864-201ENST00000617935 70 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AL138960.2-201ENST00000625145 535 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 LINC00622-201ENST00000562811 1570 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 AC108467.2-201ENST00000617640 1597 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.07□□□□□ -1.6
BLOC1S4Q9NUP1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC009951.1-201ENST00000623674 2614 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 EOGT-210ENST00000615922 1931 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC234772.1-201ENST00000377927 937 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 MIR195-201ENST00000385194 87 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AL139128.1-201ENST00000413921 941 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 MRPL50P1-201ENST00000431951 384 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 RPL23AP43-201ENST00000446445 471 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 GXYLT1P1-201ENST00000446657 490 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 Z95152.1-201ENST00000453556 656 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 DEFB109F-201ENST00000491870 277 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC005351.1-201ENST00000511152 786 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AP006289.1-201ENST00000538089 277 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AL161713.1-201ENST00000555538 145 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 MIR4789-201ENST00000577469 82 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AC091178.1-203ENST00000584586 279 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AL353726.1-201ENST00000614041 1000 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 MIR6891-201ENST00000618788 93 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 MIR6730-201ENST00000622213 67 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AL138955.1-201ENST00000622881 1040 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 AP006248.2-201ENST00000623309 592 ntBASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BLOC1S4Q9NUP1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms