Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 RN7SL600P-201ENST00000581811 299 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 AC105105.5-201ENST00000622635 1294 ntBASIC4.07□□□□□ -1.76
TREX1Q9NSU2 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TREX1Q9NSU2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 KPNA2P2-201ENST00000419546 1489 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AL356317.1-201ENST00000396110 1436 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 SNORA60-201ENST00000362396 134 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 LAP3P1-201ENST00000403648 294 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AL138785.1-201ENST00000425821 331 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 COX6CP15-201ENST00000426313 211 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 RPL7P31-201ENST00000450192 724 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC105137.1-201ENST00000484355 562 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC106806.2-201ENST00000509365 500 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC025857.1-201ENST00000525252 377 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 MIR4716-201ENST00000579628 84 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 IPO5P1-202ENST00000600039 287 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 SNX6P1-201ENST00000601728 1224 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AL451044.1-201ENST00000604867 238 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC026368.1-201ENST00000614934 690 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC074276.2-201ENST00000619891 348 ntBASIC4.06□□□□□ -1.76
TREX1Q9NSU2 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TREX1Q9NSU2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 SNORD35B-201ENST00000363660 87 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 RNU11-4P-201ENST00000391149 133 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 OR6C69P-201ENST00000394268 893 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 TPT1P2-201ENST00000413105 503 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 RPL23AP38-201ENST00000423801 469 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AL121578.1-201ENST00000428051 892 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC073143.1-201ENST00000436316 395 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 RPS4XP4-201ENST00000443195 763 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 HMGB3P22-202ENST00000451823 572 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 RPL38P1-201ENST00000460914 211 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 CYCSP29-201ENST00000533731 318 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC025627.2-201ENST00000576220 160 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 PSMA6P4-201ENST00000603247 718 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AL139286.1-201ENST00000604465 483 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC128687.2-201ENST00000609657 566 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 NF1P10-201ENST00000613227 742 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC009318.3-201ENST00000616916 503 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC010608.2-201ENST00000624830 470 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 CFTRP2-201ENST00000634304 199 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 AC009452.1-201ENST00000640823 606 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 OR52H1-202ENST00000641796 1061 ntBASIC4.05□□□□□ -1.76
TREX1Q9NSU2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TREX1Q9NSU2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TREX1Q9NSU2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms