Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR1204-201ENST00000408388 67 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 KRTAP9-11P-201ENST00000431013 525 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AL354761.1-201ENST00000434190 526 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC098828.1-201ENST00000436164 440 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC004801.2-202ENST00000463559 283 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RPL23P10-201ENST00000468780 412 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RNF7P1-201ENST00000478598 342 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RN7SL580P-201ENST00000492489 287 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 NDUFB5P1-201ENST00000508134 564 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RNU6-864P-201ENST00000516256 108 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC016954.1-201ENST00000549976 745 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 EIF4A1P4-201ENST00000550578 1213 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RPL23AP77-201ENST00000588044 463 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 TUG1_3.1-201ENST00000616187 237 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC048380.3-201ENST00000623145 796 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 RN7SKP168-201ENST00000410910 300 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC114491.1-201ENST00000416095 246 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC114760.1-201ENST00000420310 652 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AL360081.1-201ENST00000428299 555 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC018644.1-201ENST00000429934 551 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC239367.1-201ENST00000439389 936 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AL445686.1-201ENST00000443086 348 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 PTMAP3-201ENST00000447474 330 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 SETP20-201ENST00000457046 852 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 Y_RNA.635-201ENST00000459041 101 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC068522.1-201ENST00000482895 345 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 RPL39P5-202ENST00000512505 151 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 GLTPP1-201ENST00000528859 622 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC018630.1-201ENST00000541376 925 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC055716.1-201ENST00000550077 495 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AL163952.1-202ENST00000569625 600 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AL683813.2-201ENST00000605245 502 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 uc_338.15-201ENST00000615470 191 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 RN7SL301P-202ENST00000618767 298 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 GUCY1B2-204ENST00000531898 1979 ntBASIC8.66□□□□□ -1.02
RTN4Q9NQC3 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
RTN4Q9NQC3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RTN4Q9NQC3 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms