Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL672212.1-201ENST00000422246 400 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AL645939.3-201ENST00000435408 225 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC019185.3-201ENST00000438805 323 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 CALM1P1-201ENST00000442082 433 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 POU5F1P5-201ENST00000445059 658 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 RN7SL197P-201ENST00000466981 299 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC090602.1-201ENST00000469695 252 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 RN7SL413P-201ENST00000482700 297 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC139783.2-201ENST00000504847 1145 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC114967.1-201ENST00000504890 259 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 IGKV1D-32-201ENST00000517449 318 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 MIR3682-201ENST00000581338 84 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AL161729.3-201ENST00000603533 673 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AP000942.4-201ENST00000604811 241 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC090948.2-201ENST00000607363 564 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 AL732618.1-201ENST00000623251 301 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC063952.1-203ENST00000634410 658 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AC083837.1-201ENST00000565297 2994 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 CCT4P2-201ENST00000233836 1548 ntBASIC5.98□□□□□ -1.45
SSU72Q9NP77 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSU72Q9NP77 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.98□□□□□ -1.45
SSU72Q9NP77 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSU72Q9NP77 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 OR52B1P-201ENST00000316506 909 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 RN7SKP185-201ENST00000362813 326 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 Y_RNA.72-201ENST00000362894 103 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RNU6-251P-201ENST00000363235 104 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 Y_RNA.159-201ENST00000363674 87 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RNU6-282P-201ENST00000365357 103 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 AL139100.1-201ENST00000408001 498 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RNU2-6P-201ENST00000411404 190 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RSU1P3-201ENST00000412878 835 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RPS6P23-201ENST00000413224 722 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 AL161742.1-201ENST00000418154 584 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RPS7P8-201ENST00000418311 581 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 SNRPEP10-201ENST00000420249 274 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 VTI1BP4-201ENST00000427516 527 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSU72Q9NP77 RPL31P35-201ENST00000431058 377 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 GTF2IP20-201ENST00000431663 360 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC239800.1-201ENST00000442049 719 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 GAPDHP37-201ENST00000442317 968 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 RPL23AP20-201ENST00000447965 421 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 BX842559.2-201ENST00000451418 605 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 RPS20P20-201ENST00000460498 340 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AL161747.1-201ENST00000480068 358 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 FAM172BP-201ENST00000487497 1089 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC112204.1-201ENST00000502591 103 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC106822.1-201ENST00000502647 526 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC006390.1-201ENST00000508068 283 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC010486.1-201ENST00000511793 424 ntBASIC5.97□□□□□ -1.45
SSU72Q9NP77 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.97□□□□□ -1.45
SSU72Q9NP77 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms