Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS11Q9H270 OR9K1P-201ENST00000326513 941 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS11Q9H270 RNA5SP273-201ENST00000362484 113 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 OOSP1-201ENST00000398992 1270 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AL009179.1-201ENST00000406085 265 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 MIR1275-201ENST00000408770 80 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 RNU2-50P-201ENST00000410494 143 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 NPM1P4-201ENST00000414095 812 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 RPS7P9-201ENST00000414704 586 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 RPL6P29-201ENST00000414863 865 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 ATG4AP1-201ENST00000416893 538 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 USP9YP20-201ENST00000419224 558 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 FNDC3CP-201ENST00000420795 1155 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AL109913.1-201ENST00000421173 514 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC099336.2-201ENST00000422457 254 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 DYNLL1P7-201ENST00000429273 258 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS11Q9H270 USP9YP29-201ENST00000445112 563 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 YWHAQP9-201ENST00000445891 512 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AL109741.2-201ENST00000455561 343 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC099560.2-201ENST00000457554 255 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC104339.1-201ENST00000465478 348 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS11Q9H270 HMGB1P23-201ENST00000518743 568 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 C1GALT1P3-201ENST00000522049 819 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 COX6B1P6-201ENST00000522347 255 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS11Q9H270 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AL390334.1-201ENST00000556395 450 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC012414.6-201ENST00000568241 401 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 MTCYBP13-201ENST00000578634 1093 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 WISP1-OT1-201ENST00000602893 642 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC123786.2-201ENST00000603459 275 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AP000907.4-201ENST00000604143 237 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC069545.1-201ENST00000605671 358 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 AL139418.1-201ENST00000613613 177 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 AL356321.1-201ENST00000621360 228 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AL359757.1-201ENST00000623176 255 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC099654.14-201ENST00000638599 341 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 AC099654.12-201ENST00000639868 649 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS11Q9H270 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS11Q9H270 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VPS11Q9H270 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VPS11Q9H270 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS11Q9H270 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS11Q9H270 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS11Q9H270 AC046144.1-201ENST00000478559 1853 ntBASIC5.54□□□□□ -1.52
VPS11Q9H270 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC073136.1-201ENST00000449426 2884 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC016716.1-201ENST00000265882 708 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 SNORD56.6-201ENST00000384569 71 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 MIR92A2-201ENST00000385299 75 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 BTF3P7-201ENST00000407097 488 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC007899.1-201ENST00000412776 775 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AC009302.1-201ENST00000417147 390 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 Z75741.2-201ENST00000417272 1167 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS11Q9H270 C1DP1-201ENST00000426049 402 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AC010975.2-201ENST00000427781 588 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 LARP1BP3-201ENST00000437229 869 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS11Q9H270 AURKAPS1-201ENST00000451805 1212 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 AL606490.1-201ENST00000452266 765 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS11Q9H270 CFTRP1-201ENST00000456646 183 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 RPL31P58-201ENST00000469001 379 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 CCDC75P1-201ENST00000469247 791 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 COX6B1P2-201ENST00000489624 230 ntBASIC5.53□□□□□ -1.52
VPS11Q9H270 OR4G11P-201ENST00000492842 939 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 355.7 ms