Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 PSMA6P4-201ENST00000603247 718 ntBASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 AL161729.3-201ENST00000603533 673 ntBASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 AL049844.2-201ENST00000604280 628 ntBASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 AC006338.2-201ENST00000616864 791 ntBASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.72□□□□□ -1.65
CCSER1Q9C0I3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.71□□□□□ -1.65
CCSER1Q9C0I3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
CCSER1Q9C0I3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCSER1Q9C0I3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CCSER1Q9C0I3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC096656.1-201ENST00000623826 1364 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 RPL32P3-201ENST00000359025 275 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 RNA5SP388-201ENST00000362584 119 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 SNORA70.2-201ENST00000364506 135 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AL589655.1-201ENST00000405398 482 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC109327.1-201ENST00000471666 403 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 RNU6-760P-201ENST00000516078 97 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 IGKV2D-10-201ENST00000520194 281 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC011472.4-201ENST00000615848 491 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 MLECP1-201ENST00000615893 709 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AC011944.2-201ENST00000624440 683 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 AL118496.1-201ENST00000440201 1812 ntBASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCSER1Q9C0I3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 MTND4P26-201ENST00000415971 1359 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 RNU6-146P-201ENST00000384602 108 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 RN7SKP182-201ENST00000410772 298 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC234779.1-201ENST00000425910 285 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 RNA5SP246-201ENST00000458909 119 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC093770.1-201ENST00000511559 571 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC099522.1-202ENST00000514718 367 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC105233.3-201ENST00000531125 744 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC008083.2-201ENST00000546707 476 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC007599.1-201ENST00000568688 1174 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 MIR4697-201ENST00000582977 78 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 MIR3138-201ENST00000585238 82 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AL391834.1-201ENST00000609609 560 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 MIR6716-201ENST00000613413 80 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC114781.5-201ENST00000615297 108 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AP005264.7-201ENST00000625003 745 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC017002.4-201ENST00000604721 1525 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 AC097504.1-201ENST00000515103 2415 ntBASIC4.7□□□□□ -1.66
CCSER1Q9C0I3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms