Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 NUP58P1-201ENST00000502546 1738 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 DBF4P1-201ENST00000412976 1892 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RNU6-1115P-201ENST00000362490 106 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RNU6-1188P-201ENST00000363795 107 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.255-201ENST00000364581 97 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.364-201ENST00000365532 101 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 Y_RNA.555-201ENST00000384673 110 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 MIR548K-201ENST00000408406 116 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 MIR548F5-201ENST00000408421 86 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RNU2-9P-201ENST00000410194 145 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 MTCO3P19-201ENST00000415864 321 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RPL36P1-201ENST00000419720 225 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 FTH1P5-201ENST00000425761 545 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 PSMD10P3-201ENST00000437000 448 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 LSM1P1-201ENST00000438629 273 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RPL21P23-201ENST00000446654 460 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 MIR2053-201ENST00000459295 91 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RN7SL172P-201ENST00000460535 303 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RPL34P33-201ENST00000486062 334 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC106872.3-201ENST00000495104 446 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC131392.1-201ENST00000506490 633 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC109481.1-201ENST00000509173 282 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 SNORA70.20-201ENST00000516848 126 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RNU6-1003P-201ENST00000517099 105 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 MRPS16P1-201ENST00000523462 412 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC113195.1-201ENST00000579952 141 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC004805.2-201ENST00000605382 482 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 RNU6-89P-201ENST00000606519 100 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AL161901.1-201ENST00000624954 3425 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC022905.1-201ENST00000503430 3048 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AL049641.1-201ENST00000441055 1948 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 AC016930.1-201ENST00000468766 2205 ntBASIC6.56□□□□□ -1.36
COL25A1Q9BXS0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AP002370.1-201ENST00000528055 1602 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RNA5SP346-201ENST00000363541 121 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RNU6-746P-201ENST00000384112 109 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RNU6-769P-201ENST00000384407 104 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AL591416.1-201ENST00000404015 867 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 OR6E1P-201ENST00000414424 923 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AL359092.1-201ENST00000417156 265 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AL158073.1-201ENST00000426848 1104 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 ERLEC1P1-201ENST00000433806 578 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC104332.1-201ENST00000440471 797 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 HSFY6P-201ENST00000445573 403 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC107399.1-201ENST00000451226 265 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC026336.1-201ENST00000466577 351 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RPS20P21-201ENST00000466859 343 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RN7SL643P-201ENST00000471845 291 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RN7SL369P-201ENST00000477138 299 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 RPL38P3-201ENST00000484463 213 ntBASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.55□□□□□ -1.36
COL25A1Q9BXS0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms