Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.09□□□□□ -1.6
ABCA3Q99758 AL121878.1-201ENST00000418638 859 ntBASIC5.09□□□□□ -1.6
ABCA3Q99758 AC004448.2-201ENST00000422360 586 ntBASIC5.09□□□□□ -1.6
ABCA3Q99758 AC026784.1-201ENST00000507986 352 ntBASIC5.09□□□□□ -1.6
ABCA3Q99758 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.09□□□□□ -1.6
ABCA3Q99758 AC010342.1-201ENST00000514047 877 ntBASIC5.09□□□□□ -1.6
ABCA3Q99758 OR7E13P-201ENST00000526052 910 ntBASIC5.09□□□□□ -1.6
ABCA3Q99758 Z95327.2-201ENST00000414579 1873 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ABCA3Q99758 SAMMSON-213ENST00000641336 1521 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ABCA3Q99758 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.08□□□□□ -1.6
ABCA3Q99758 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ABCA3Q99758 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.08□□□□□ -1.6
ABCA3Q99758 AC005019.1-201ENST00000436455 431 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 AC127537.2-201ENST00000439258 465 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 AC138938.1-201ENST00000515431 782 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.08□□□□□ -1.6
ABCA3Q99758 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.08□□□□□ -1.6
ABCA3Q99758 AC097505.1-201ENST00000610199 565 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 AC022106.2-201ENST00000620114 757 ntBASIC5.08□□□□□ -1.6
ABCA3Q99758 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ABCA3Q99758 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ABCA3Q99758 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.07□□□□□ -1.6
ABCA3Q99758 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 AC118273.1-201ENST00000525324 3006 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 SNORA48.2-201ENST00000390926 124 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 AL031121.1-201ENST00000406553 254 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ABCA3Q99758 HMGB1P37-201ENST00000439613 609 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 RPL37P3-201ENST00000456825 293 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 PRELID3BP6-201ENST00000503839 571 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.07□□□□□ -1.6
ABCA3Q99758 AC008011.1-201ENST00000545989 227 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.07□□□□□ -1.6
ABCA3Q99758 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.07□□□□□ -1.6
ABCA3Q99758 AC006960.3-201ENST00000561845 705 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 SLC25A36P1-201ENST00000590111 465 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 AC009303.3-201ENST00000591103 736 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 AC133552.5-201ENST00000604266 540 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 AC115621.1-201ENST00000604653 858 ntBASIC5.07□□□□□ -1.6
ABCA3Q99758 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.07□□□□□ -1.6
ABCA3Q99758 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.07□□□□□ -1.6
ABCA3Q99758 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.07□□□□□ -1.6
ABCA3Q99758 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ABCA3Q99758 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ABCA3Q99758 U3.23-201ENST00000391132 200 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 HSFY4P-201ENST00000415994 1181 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCA3Q99758 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 MTND6P6-201ENST00000478031 263 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AC012158.1-204ENST00000483430 465 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 IGHV3-32-201ENST00000519182 355 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.06□□□□□ -1.6
ABCA3Q99758 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
ABCA3Q99758 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 A2MP1-204ENST00000566278 4130 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ABCA3Q99758 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ABCA3Q99758 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ABCA3Q99758 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.06□□□□□ -1.6
ABCA3Q99758 RNU4-35P-201ENST00000362588 141 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 MIR1289-1-201ENST00000408836 144 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 CBX1P3-201ENST00000413296 527 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AC006994.1-201ENST00000438212 839 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AL031584.1-201ENST00000447169 754 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.06□□□□□ -1.6
ABCA3Q99758 IGKV2-38-201ENST00000517443 247 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 RANP9-201ENST00000519957 271 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AC103843.2-201ENST00000530523 682 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 MIR4433B-201ENST00000581329 102 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AL513477.2-201ENST00000607858 568 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 AC095038.2-201ENST00000621464 1070 ntBASIC5.06□□□□□ -1.6
ABCA3Q99758 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.06□□□□□ -1.6
ABCA3Q99758 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.05□□□□□ -1.6
ABCA3Q99758 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
ABCA3Q99758 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ABCA3Q99758 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.05□□□□□ -1.6
ABCA3Q99758 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms