Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL022393.1-201ENST00000625142 1677 ntBASIC6.4□□□□□ -1.39
IFT140Q96RY7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.39□□□□□ -1.39
IFT140Q96RY7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
IFT140Q96RY7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.39□□□□□ -1.39
IFT140Q96RY7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.39□□□□□ -1.39
IFT140Q96RY7 RANP9-201ENST00000519957 271 ntBASIC6.39□□□□□ -1.39
IFT140Q96RY7 EIF4BP1-201ENST00000554881 351 ntBASIC6.39□□□□□ -1.39
IFT140Q96RY7 AC079171.1-201ENST00000568788 914 ntBASIC6.39□□□□□ -1.39
IFT140Q96RY7 MIR4433B-201ENST00000581329 102 ntBASIC6.39□□□□□ -1.39
IFT140Q96RY7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.39□□□□□ -1.39
IFT140Q96RY7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
IFT140Q96RY7 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.39□□□□□ -1.39
IFT140Q96RY7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
IFT140Q96RY7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
IFT140Q96RY7 AL365440.1-201ENST00000436135 2167 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 MIR1251-201ENST00000408552 70 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 PRELID3BP10-201ENST00000431957 584 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 SETD6P1-201ENST00000444575 317 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC069240.1-201ENST00000548774 375 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC010503.3-201ENST00000594355 540 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 AL049840.6-202ENST00000603373 279 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC135507.2-201ENST00000612443 309 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC124312.6-202ENST00000623624 418 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 AC138907.10-201ENST00000623708 983 ntBASIC6.38□□□□□ -1.39
IFT140Q96RY7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
IFT140Q96RY7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
IFT140Q96RY7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
IFT140Q96RY7 AC097504.1-201ENST00000515103 2415 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
IFT140Q96RY7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
IFT140Q96RY7 AC017083.1-201ENST00000428093 483 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 ATP5JP1-201ENST00000431631 322 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 AL445433.1-201ENST00000457507 257 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC6.37□□□□□ -1.39
IFT140Q96RY7 AC007599.1-201ENST00000568688 1174 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
IFT140Q96RY7 AC008759.1-201ENST00000589783 983 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 CDY11P-201ENST00000447168 1651 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.37□□□□□ -1.39
IFT140Q96RY7 AC004944.1-201ENST00000517807 3059 ntBASIC6.37□□□□□ -1.39
IFT140Q96RY7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
IFT140Q96RY7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
IFT140Q96RY7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
IFT140Q96RY7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
IFT140Q96RY7 SNORD9-201ENST00000362566 104 ntBASIC6.36□□□□□ -1.39
IFT140Q96RY7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.36□□□□□ -1.39
IFT140Q96RY7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.36□□□□□ -1.39
IFT140Q96RY7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.36□□□□□ -1.39
IFT140Q96RY7 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.36□□□□□ -1.39
IFT140Q96RY7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
IFT140Q96RY7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
IFT140Q96RY7 CDY3P-201ENST00000454543 1618 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 GNG5P1-201ENST00000255500 204 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 RPL36AP10-201ENST00000421785 322 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 RN7SL271P-201ENST00000487601 295 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 RNU2-27P-201ENST00000516185 142 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 AC124068.1-201ENST00000563131 678 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 AC005086.4-201ENST00000623065 213 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 AC139426.3-201ENST00000605648 2059 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
IFT140Q96RY7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
IFT140Q96RY7 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.35□□□□□ -1.39
IFT140Q96RY7 AL358178.1-201ENST00000407698 397 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 RPL7AP73-201ENST00000413490 353 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 RPL7P44-201ENST00000424827 742 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 AGGF1P3-201ENST00000493675 1213 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 RPL7P23-201ENST00000493874 747 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC022695.1-201ENST00000522089 237 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC103843.2-201ENST00000530523 682 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC010680.3-201ENST00000604215 520 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms