Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZNF962P-201ENST00000443465 3140 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL21A1Q96P44 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL21A1Q96P44 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 AC009229.4-201ENST00000623854 1947 ntBASIC3.97□□□□□ -1.77
COL21A1Q96P44 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL21A1Q96P44 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.97□□□□□ -1.77
COL21A1Q96P44 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
COL21A1Q96P44 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
COL21A1Q96P44 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.96□□□□□ -1.77
COL21A1Q96P44 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
COL21A1Q96P44 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL158163.1-201ENST00000603915 1649 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL607077.1-201ENST00000401718 499 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 ZNF603P-201ENST00000405613 487 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 RNU4-25P-201ENST00000410569 230 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL353597.2-202ENST00000434901 373 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL357520.1-201ENST00000441557 453 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 RPL23AP81-201ENST00000455252 467 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC007537.2-201ENST00000472093 511 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC006517.1-201ENST00000480485 328 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC068587.1-201ENST00000483613 781 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC107016.1-201ENST00000550463 337 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 AC145207.9-201ENST00000623802 325 ntBASIC3.96□□□□□ -1.78
COL21A1Q96P44 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL21A1Q96P44 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL21A1Q96P44 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
COL21A1Q96P44 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL21A1Q96P44 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC090971.4-201ENST00000560291 1800 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC017007.4-201ENST00000503353 1352 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL583835.1-201ENST00000399570 407 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL034374.1-201ENST00000406329 351 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL035696.2-201ENST00000407941 709 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 EIF4A1P3-201ENST00000411521 244 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 RPL6P29-201ENST00000414863 865 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 MFSD13B-201ENST00000420133 1290 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC007064.3-201ENST00000422608 359 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL157831.1-201ENST00000426134 473 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC016712.1-201ENST00000431088 378 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 RPL23AP89-201ENST00000439324 255 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 CLIC4P1-201ENST00000453177 535 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL133477.1-201ENST00000457472 514 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 RN7SL385P-201ENST00000468873 276 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 RPL23AP71-201ENST00000470966 469 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 RPL35P6-201ENST00000490024 372 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC106806.2-201ENST00000509365 500 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 TRAV8-5-201ENST00000537369 341 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL391597.1-201ENST00000618707 694 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 AL359715.5-201ENST00000623431 443 ntBASIC3.95□□□□□ -1.78
COL21A1Q96P44 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.95□□□□□ -1.78
COL21A1Q96P44 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL21A1Q96P44 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms