Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 CASC19-248ENST00000641674 1356 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RNU6-98P-201ENST00000384173 107 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 Y_RNA.517-201ENST00000384551 106 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 SNORD65.1-201ENST00000390889 71 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 DEFB108C-201ENST00000400154 252 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RN7SKP125-201ENST00000410481 302 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RN7SKP59-201ENST00000410520 314 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RNU6-77P-201ENST00000410554 91 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RAB28P1-201ENST00000411517 641 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC105402.1-201ENST00000413336 545 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 PTP4A1P1-201ENST00000420539 515 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RPL23AP4-201ENST00000427757 463 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 MTCO1P54-201ENST00000430139 712 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 USP9YP22-201ENST00000438971 294 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RHEBP2-201ENST00000450289 600 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC073522.1-201ENST00000483312 377 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC109486.1-201ENST00000486833 374 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RN7SL30P-201ENST00000488416 306 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC109445.1-201ENST00000512356 383 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RNU6-678P-201ENST00000516832 109 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC109635.6-201ENST00000525487 1113 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC012414.6-201ENST00000568241 401 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 FO393422.1-201ENST00000603908 708 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 RPSAP73-201ENST00000614820 330 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 PCMTD1P7-201ENST00000634506 357 ntBASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.09□□□□□ -1.43
CHAMP1Q96JM3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.09□□□□□ -1.44
CHAMP1Q96JM3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.09□□□□□ -1.44
CHAMP1Q96JM3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CHAMP1Q96JM3 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.09□□□□□ -1.44
CHAMP1Q96JM3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AL645927.1-201ENST00000396783 406 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 RPL7P8-201ENST00000411964 730 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 RPL34P3-201ENST00000421454 338 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 MTCYBP5-201ENST00000423752 1135 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 RPL7P29-201ENST00000437151 728 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AL031667.1-201ENST00000440222 725 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 OR51K1P-201ENST00000510214 950 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 NRON-201ENST00000517270 370 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AP000873.5-201ENST00000533906 236 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 HAUS8P1-201ENST00000549005 542 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC007954.1-201ENST00000554198 494 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC000068.2-201ENST00000608816 460 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC100793.4-201ENST00000613683 429 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC008443.7-201ENST00000622195 246 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AL672167.1-205ENST00000641112 3080 ntBASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.08□□□□□ -1.44
CHAMP1Q96JM3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms