Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 AC025574.1-201ENST00000554784 1653 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 AP000542.2-201ENST00000623199 6179 ntBASIC5.88□□□□□ -1.47
ERCC4Q92889 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC4Q92889 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC4Q92889 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 STX3-208ENST00000641815 3236 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC4Q92889 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC4Q92889 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 IL6STP1-201ENST00000346911 1020 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 RNU6-1200P-201ENST00000384162 107 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 MIR105-1-201ENST00000385222 81 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AL136131.1-201ENST00000406079 803 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC4Q92889 RPL7P44-201ENST00000424827 742 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC4Q92889 ATP5F1P1-201ENST00000433775 569 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC4Q92889 GAPDHP25-201ENST00000447061 1001 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 RPL12P26-201ENST00000452430 487 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC4Q92889 YWHAEP1-201ENST00000453697 763 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC023141.9-201ENST00000458734 412 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 RPL7P18-201ENST00000478965 734 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC4Q92889 HNRNPKP5-201ENST00000515300 253 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC027544.3-201ENST00000535082 757 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC022404.1-201ENST00000555320 273 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AC027807.1-201ENST00000559921 996 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 EIF1P6-201ENST00000600054 334 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 MIR6729-201ENST00000618194 65 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC4Q92889 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.87□□□□□ -1.47
ERCC4Q92889 AL392088.2-201ENST00000637607 285 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 AC025263.3-201ENST00000622965 1396 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC4Q92889 VPS35P1-201ENST00000563400 1518 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 LINC01963-201ENST00000562038 3148 ntBASIC5.87□□□□□ -1.47
ERCC4Q92889 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ERCC4Q92889 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC4Q92889 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AL731566.1-201ENST00000620490 1937 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 MTND5P29-201ENST00000458676 1807 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 MTND4P31-201ENST00000425607 1343 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 ZNF652P1-201ENST00000442420 1309 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RNU6-1339P-201ENST00000363574 91 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RNA5SP242-201ENST00000364171 118 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RNA5SP223-201ENST00000365174 120 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ERCC4Q92889 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ERCC4Q92889 RNA5SP80-201ENST00000410475 111 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RNU6-77P-201ENST00000410554 91 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RN7SKP273-201ENST00000411392 314 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 MTCO3P41-201ENST00000414801 328 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.86□□□□□ -1.47
ERCC4Q92889 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC006366.1-201ENST00000422002 759 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 CYCSP24-201ENST00000445119 316 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 RPL7L1P1-201ENST00000448259 785 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.86□□□□□ -1.47
ERCC4Q92889 AL591363.1-201ENST00000450091 483 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 DNAJC19P8-201ENST00000452887 259 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 NDUFA12P1-201ENST00000455914 406 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.86□□□□□ -1.47
ERCC4Q92889 RN7SL189P-201ENST00000468631 289 ntBASIC5.86□□□□□ -1.47
ERCC4Q92889 SETP11-201ENST00000473027 690 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms