Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.37□□□□□ -1.39
TOPBP1Q92547 SNORA62.6-201ENST00000606322 83 ntBASIC6.37□□□□□ -1.39
TOPBP1Q92547 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC6.37□□□□□ -1.39
TOPBP1Q92547 CDY3P-201ENST00000454543 1618 ntBASIC6.37□□□□□ -1.39
TOPBP1Q92547 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TOPBP1Q92547 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
TOPBP1Q92547 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOPBP1Q92547 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TOPBP1Q92547 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 RNA5SP50-201ENST00000363731 107 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 MIR1251-201ENST00000408552 70 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 AC005019.1-201ENST00000436455 431 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 OR52Y1P-201ENST00000452418 828 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 AC006511.1-201ENST00000470614 315 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 AC093815.1-201ENST00000508637 280 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 HIGD1AP18-201ENST00000520730 278 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 AC100770.1-201ENST00000532310 322 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 AL031658.2-201ENST00000616850 651 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOPBP1Q92547 HSPD1P11-201ENST00000508643 1702 ntBASIC6.36□□□□□ -1.39
TOPBP1Q92547 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOPBP1Q92547 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOPBP1Q92547 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.36□□□□□ -1.39
TOPBP1Q92547 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOPBP1Q92547 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TOPBP1Q92547 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOPBP1Q92547 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 RPL37P3-201ENST00000456825 293 ntBASIC6.35□□□□□ -1.39
TOPBP1Q92547 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 AC006077.1-201ENST00000604746 343 ntBASIC6.35□□□□□ -1.39
TOPBP1Q92547 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOPBP1Q92547 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TOPBP1Q92547 AC004448.2-201ENST00000422360 586 ntBASIC6.35□□□□□ -1.39
TOPBP1Q92547 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 RN7SL807P-201ENST00000470923 297 ntBASIC6.35□□□□□ -1.39
TOPBP1Q92547 DEFB109A-201ENST00000482450 265 ntBASIC6.35□□□□□ -1.39
TOPBP1Q92547 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 GNRHR2P1-201ENST00000555315 631 ntBASIC6.35□□□□□ -1.39
TOPBP1Q92547 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TOPBP1Q92547 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 AC139426.3-201ENST00000605648 2059 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TOPBP1Q92547 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 RPL23AP12-201ENST00000467573 473 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 RNA5SP208-201ENST00000516156 78 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 RNU2-27P-201ENST00000516185 142 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 AC008802.1-201ENST00000519121 791 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 AC103843.2-201ENST00000530523 682 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 MIR4325-201ENST00000583049 90 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 SLC25A36P1-201ENST00000590111 465 ntBASIC6.34□□□□□ -1.39
TOPBP1Q92547 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TOPBP1Q92547 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.34□□□□□ -1.4
TOPBP1Q92547 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
TOPBP1Q92547 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
TOPBP1Q92547 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
TOPBP1Q92547 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOPBP1Q92547 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOPBP1Q92547 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TOPBP1Q92547 AC010285.3-201ENST00000511668 676 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 AC010342.1-201ENST00000514047 877 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 RN7SKP83-201ENST00000516512 178 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 AC008694.2-201ENST00000517591 306 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 OR4A12P-201ENST00000530847 918 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.33□□□□□ -1.4
TOPBP1Q92547 AC068790.5-201ENST00000602741 355 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 AL121890.2-201ENST00000617644 465 ntBASIC6.33□□□□□ -1.4
TOPBP1Q92547 SCARNA15.3-201ENST00000626315 122 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms