Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 RPL7P59-201ENST00000447700 943 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 RPL6P9-201ENST00000466502 859 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC006511.1-201ENST00000470614 315 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC108860.1-201ENST00000484521 383 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 RN7SL271P-201ENST00000487601 295 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 MTATP6P22-201ENST00000507369 598 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 GUSBP9-201ENST00000510138 584 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 TXNP6-201ENST00000510190 310 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 ARL2BPP6-201ENST00000512757 439 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 RNA5SP385-201ENST00000515947 110 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 RNU4-60P-201ENST00000517239 135 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 IGKV2-38-201ENST00000517443 247 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 IGLVIV-64-201ENST00000518581 301 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AL049779.2-201ENST00000553847 315 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 GNRHR2P1-201ENST00000555315 631 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 OR4H12P-201ENST00000556269 907 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC027176.2-201ENST00000559166 746 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AL133457.1-201ENST00000564251 987 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC105036.1-201ENST00000566222 271 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC010547.6-201ENST00000571789 193 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 CCDC58P1-201ENST00000578567 430 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC068020.1-201ENST00000594215 661 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC112503.1-201ENST00000608436 391 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AP000864.1-201ENST00000609424 650 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AP000255.1-201ENST00000610276 676 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 MIR6885-201ENST00000612241 66 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AL591424.2-201ENST00000617023 128 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 MIR6807-201ENST00000621968 92 ntBASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTSSBQ8NFR3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 THAP12P4-201ENST00000528321 2266 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 LINC00622-201ENST00000562811 1570 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 RN7SKP250-201ENST00000363924 321 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL133270.1-201ENST00000402635 279 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 MIR1251-201ENST00000408552 70 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL390774.1-201ENST00000411924 246 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC013404.1-201ENST00000413068 249 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 CLCN3P1-201ENST00000423965 1017 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC092646.1-201ENST00000427142 901 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL627308.1-201ENST00000435693 821 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 HMGB1P45-201ENST00000435986 653 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 HMGB1P12-201ENST00000438594 598 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 PA2G4P1-201ENST00000442248 1197 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL500522.2-201ENST00000448562 343 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 NANOGP10-201ENST00000453325 895 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC079841.1-201ENST00000481228 950 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 RPS4XP13-201ENST00000483219 789 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms