Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 U8.18-201ENST00000459285 133 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AF213884.1-201ENST00000488102 463 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 RPL23AP97-201ENST00000568955 471 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC091979.2-201ENST00000607514 214 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AL357559.1-201ENST00000622228 274 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 DLD-204ENST00000437604 1859 ntTSL 2 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 ACTR3P3-201ENST00000480448 893 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC021146.3-201ENST00000511911 260 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AC007458.1-201ENST00000542812 373 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 EIF4A2P1-201ENST00000587313 1063 ntBASIC1.25□□□□□ -2.21
SYNE1Q8NF91 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC1.25□□□□□ -2.21
SYNE1Q8NF91 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 LINC00622-201ENST00000562811 1570 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AP000756.2-201ENST00000624168 2567 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 IL6STP1-201ENST00000346911 1020 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 CCL7-202ENST00000394627 696 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 KRR1P1-201ENST00000419430 803 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 OR8F1P-201ENST00000425243 930 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AL390879.2-203ENST00000426943 1121 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RN7SL293P-201ENST00000481765 281 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 MTCO1P35-201ENST00000515270 228 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RN7SKP157-201ENST00000516174 282 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC005000.2-201ENST00000605468 310 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 OR4G1P-202ENST00000641173 1788 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 OR51C1P-202ENST00000641159 1444 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC107027.3-201ENST00000565095 3473 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 NPM1P26-201ENST00000426339 738 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 TMX2P1-201ENST00000436507 708 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RPL23AP52-201ENST00000439311 478 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RPS6P2-201ENST00000454208 705 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 HSPD1P15-201ENST00000505573 1122 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AL132656.3-201ENST00000606384 1595 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC116667.1-201ENST00000604855 2072 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 ZNF833P-201ENST00000424938 1494 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RPL37P1-201ENST00000432310 284 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RPL23AP81-201ENST00000455252 467 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RPL6P9-201ENST00000466502 859 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 HMGN1P15-201ENST00000513870 295 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 PAICSP4-201ENST00000517543 1253 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC007991.1-201ENST00000522680 631 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 MIR5685-201ENST00000579080 79 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC009951.1-201ENST00000623674 2614 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RPL21P65-201ENST00000406094 466 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC026427.2-201ENST00000506228 536 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 RFPL4AP5-201ENST00000514977 504 ntBASIC1.24□□□□□ -2.21
SYNE1Q8NF91 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC1.24□□□□□ -2.21
SYNE1Q8NF91 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms