Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU4-22P-201ENST00000411058 166 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RPS3AP37-201ENST00000419176 745 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RPL36AP10-201ENST00000421785 322 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 NRBF2P3-201ENST00000432731 865 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC073052.1-201ENST00000440417 714 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC011753.3-201ENST00000443436 406 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 Z73417.1-201ENST00000447373 778 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC000111.2-201ENST00000448200 210 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 TPT1P13-201ENST00000449760 499 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC005229.2-201ENST00000456995 399 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RPS17P2-201ENST00000461663 408 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC069528.1-202ENST00000482888 637 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 MTCO3P35-201ENST00000485582 781 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC011005.3-201ENST00000491624 395 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 RPL23AP72-201ENST00000492447 435 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC010627.1-201ENST00000503819 1294 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC010285.3-201ENST00000511668 676 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 MTCO3P15-201ENST00000526563 574 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 OR5AN2P-201ENST00000534535 896 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC090312.2-201ENST00000582687 378 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AP001542.2-201ENST00000593141 364 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC234771.5-201ENST00000600161 514 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 MIR6798-201ENST00000612887 67 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 MIR6780A-201ENST00000615089 68 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 VN1R7P-201ENST00000619242 903 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC006386.1-201ENST00000619436 415 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AL121895.2-201ENST00000619558 447 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 MIR7703-201ENST00000620784 77 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AP000346.3-201ENST00000622821 210 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 CR381572.2-201ENST00000624852 397 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC092608.3-201ENST00000625017 386 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 AC090897.3-201ENST00000636973 1157 ntBASIC4.49□□□□□ -1.69
BEST3Q8N1M1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BEST3Q8N1M1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC139713.2-215ENST00000641428 5037 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 SAMMSON-213ENST00000641336 1521 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC046144.1-201ENST00000478559 1853 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 MIR298-201ENST00000401212 88 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC002524.1-201ENST00000411687 547 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC114755.2-201ENST00000413520 361 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC119751.6-201ENST00000416712 186 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 C1DP1-201ENST00000426049 402 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AC234064.1-201ENST00000436312 247 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 CR769776.1-201ENST00000441254 787 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 RPS7P5-201ENST00000441482 581 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 RPS26P30-201ENST00000443431 335 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 RPL36AP15-201ENST00000444514 266 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 TPTE2P6-202ENST00000445572 1007 ntBASIC4.48□□□□□ -1.69
BEST3Q8N1M1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms