Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 CYCSP46-201ENST00000423569 204 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC093655.2-201ENST00000425735 631 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 NANOGP4-201ENST00000427230 913 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 RPL23AP76-201ENST00000441860 458 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 RPS11P7-201ENST00000442125 465 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC003071.1-201ENST00000451219 789 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AL606490.1-201ENST00000452266 765 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC116337.2-201ENST00000477662 156 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC004924.1-201ENST00000480160 781 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 OR11I1P-201ENST00000486033 954 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 RPS24P16-201ENST00000497294 392 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC011411.1-201ENST00000509592 876 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 PRELID3BP4-201ENST00000515476 571 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC022360.1-201ENST00000521058 340 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 MED28P5-201ENST00000528254 438 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC124293.1-201ENST00000530034 493 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC027369.5-201ENST00000533838 755 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 TPRKBP2-201ENST00000565969 475 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 CYP2C60P-201ENST00000566088 139 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC018618.2-201ENST00000604770 446 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AL512329.2-201ENST00000607350 548 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC019131.2-201ENST00000609071 870 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 TUG1_1.1-201ENST00000610654 145 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC090527.3-201ENST00000619041 548 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC104985.2-201ENST00000620598 500 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 AP002505.2-201ENST00000623585 696 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 SEPT14P19-203ENST00000633205 211 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 AC023421.1-201ENST00000590535 1785 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 PABPC1P6-201ENST00000445594 1829 ntBASIC5.13□□□□□ -1.59
VRK3Q8IV63 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRK3Q8IV63 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.13□□□□□ -1.59
VRK3Q8IV63 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC073055.1-201ENST00000456901 1621 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 MRRFP1-201ENST00000435941 1675 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AP005901.5-201ENST00000545779 1796 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 RN7SKP153-201ENST00000365026 316 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC093719.1-202ENST00000392735 373 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 DUTP5-201ENST00000406790 469 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 TPMTP3-201ENST00000411928 735 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 VN1R54P-201ENST00000435210 1049 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 UBE2V1P8-201ENST00000437166 265 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 USP9YP22-201ENST00000438971 294 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 MTND1P30-201ENST00000441241 901 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AL592447.1-201ENST00000447592 540 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.12□□□□□ -1.59
VRK3Q8IV63 MTND2P24-201ENST00000453434 806 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 DNAJB5P1-201ENST00000454004 806 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 Z92846.1-201ENST00000456203 268 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 RPL7P39-201ENST00000481157 744 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 NCOR1P1-202ENST00000486162 291 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC022133.1-201ENST00000490961 571 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 AC072052.1-201ENST00000496556 306 ntBASIC5.12□□□□□ -1.59
VRK3Q8IV63 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms