Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-108P-201ENST00000365558 107 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 DEFB109C-201ENST00000382575 264 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 DEFB109B-201ENST00000382656 264 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AL359634.1-202ENST00000404721 284 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RPL12P23-201ENST00000405880 490 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SKP247-201ENST00000411094 308 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 MTND4LP17-201ENST00000414607 293 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 UQCRBP1-201ENST00000421129 336 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RPL23AP30-201ENST00000432419 501 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 MTND3P16-201ENST00000452205 344 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC044810.1-201ENST00000480271 711 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SL741P-201ENST00000482473 289 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC114324.2-202ENST00000503812 134 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SKP295-201ENST00000517264 153 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC104986.1-201ENST00000517978 436 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 HMGB1P41-201ENST00000520234 440 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AP000889.2-201ENST00000532684 490 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 RPL29P33-201ENST00000587474 316 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AC245389.1-201ENST00000605141 529 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AL390240.1-201ENST00000612950 384 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 TAB3P1-202ENST00000452645 1634 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ASNSP1-204ENST00000641977 1664 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 SNX18P3-202ENST00000565670 1750 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 FANCD2P2-201ENST00000437591 1400 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 AL139384.2-201ENST00000613809 3590 ntBASIC6.67□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.100-201ENST00000363141 102 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.158-201ENST00000363651 101 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-115P-201ENST00000364310 107 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.301-201ENST00000364990 103 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.339-201ENST00000365325 102 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-169P-201ENST00000365336 107 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 SNORD94-201ENST00000386037 137 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RPS6P23-201ENST00000413224 722 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RGS17P1-201ENST00000423358 553 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 ERLEC1P1-201ENST00000433806 578 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 PRPF38AP2-201ENST00000438179 851 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AL034369.1-201ENST00000453808 477 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 HIGD1AP8-201ENST00000453927 274 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 MTCO3P10-201ENST00000455912 772 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RPS4XP18-201ENST00000495480 763 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC025674.1-201ENST00000507074 324 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-1220P-201ENST00000517126 108 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC073581.1-201ENST00000519036 575 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC009902.1-201ENST00000519351 183 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AP003072.2-201ENST00000527756 676 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 OR4R1P-201ENST00000529879 463 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AP002404.1-201ENST00000532005 451 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC005519.1-201ENST00000554490 601 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC106785.4-201ENST00000569492 412 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC138207.8-204ENST00000579588 527 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC024267.2-201ENST00000582737 417 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 AC090525.3-201ENST00000605601 189 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 RNU6-89P-201ENST00000606519 100 ntBASIC6.66□□□□□ -1.34
LYSMD3Q7Z3D4 MIR6885-201ENST00000612241 66 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms