Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 HDAC1P2-201ENST00000453661 1398 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 GDI2P1-201ENST00000429312 1336 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RNU6-185P-201ENST00000384421 107 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RPL23AP29-201ENST00000397284 453 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL161909.1-201ENST00000397390 712 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 DPPA2P3-201ENST00000411853 655 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL139128.1-201ENST00000413921 941 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 NME1P1-201ENST00000420914 382 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RPL7P56-201ENST00000429441 717 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL445928.1-201ENST00000435545 222 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC132479.1-201ENST00000449160 144 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC011225.1-201ENST00000457751 369 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RPS23P6-201ENST00000466136 431 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 PFN1P6-201ENST00000476786 399 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RN7SL184P-201ENST00000488308 297 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 BX510359.5-201ENST00000515651 304 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 RNA5SP400-201ENST00000517155 111 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 SNORA43.3-201ENST00000517240 103 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC083923.1-201ENST00000523708 376 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC005668.1-201ENST00000571142 476 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 MIR1269B-201ENST00000580405 75 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 NRBF2P1-201ENST00000587407 859 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 CTHRC1P1-201ENST00000605383 469 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 AC091925.1-201ENST00000623204 462 ntBASIC7.63□□□□□ -1.19
RC3H1Q5TC82 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
RC3H1Q5TC82 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC110597.1-201ENST00000562669 3176 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RNU1-19P-201ENST00000363306 165 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 U8.14-201ENST00000390843 143 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RNU4-34P-201ENST00000410431 124 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RNU6-847P-201ENST00000411115 108 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RNU6-195P-201ENST00000411352 109 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 ISCA1P6-201ENST00000427740 390 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 DYNLL1P7-201ENST00000429273 258 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 GAPDHP58-201ENST00000438477 1006 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RPL5P25-201ENST00000441148 775 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RPS26P30-201ENST00000443431 335 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 CEACAMP4-201ENST00000457676 421 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC027575.1-201ENST00000481064 460 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 RPL32P9-201ENST00000487963 407 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC231760.1-201ENST00000498002 260 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 IGBP1P1-201ENST00000554337 1009 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC055876.1-202ENST00000567053 138 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC006270.2-201ENST00000578523 652 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC125494.2-201ENST00000602431 657 ntBASIC7.62□□□□□ -1.19
RC3H1Q5TC82 AC011816.2-201ENST00000607089 556 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms