Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL356095.1-201ENST00000417217 199 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 OR5BE1P-201ENST00000425977 939 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AL158073.1-201ENST00000426848 1104 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AL357520.1-201ENST00000441557 453 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 RPL31P61-201ENST00000496160 376 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MYL12AP1-201ENST00000518490 515 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC068446.3-201ENST00000555285 382 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 ELOCP28-201ENST00000590044 317 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC123786.2-201ENST00000603459 275 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC010200.2-201ENST00000605098 235 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AL591034.3-201ENST00000605511 685 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC015813.4-201ENST00000610469 179 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MIR6867-201ENST00000610636 67 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MIR6868-201ENST00000611215 58 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MIR492-201ENST00000638676 116 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 OR5BE1P-202ENST00000641168 1176 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 SNORA3C-201ENST00000408792 125 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC115285.1-201ENST00000424879 736 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 RPS11P1-201ENST00000451072 473 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 FGF7P3-201ENST00000454645 303 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC022336.1-201ENST00000475510 337 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 LARP7P4-201ENST00000481075 878 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC025857.1-201ENST00000525252 377 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 PDCD5P1-201ENST00000543528 309 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC110743.1-201ENST00000584870 478 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC008638.3-201ENST00000603341 463 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 AC006338.2-201ENST00000616864 791 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 OR10AB1P-202ENST00000641219 1686 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 MTND4P26-201ENST00000415971 1359 ntBASIC4.25□□□□□ -1.73
PTPN20Q4JDL3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 SNORA70C-201ENST00000384538 135 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 MT-TP-201ENST00000387461 68 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AL022722.2-201ENST00000402519 180 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 HMGB3P19-201ENST00000403971 560 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 RNA5SP317-201ENST00000410176 116 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 RNA5SP311-201ENST00000411290 116 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AL160275.2-201ENST00000412010 394 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 RPS12P5-201ENST00000423449 371 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AL355994.1-201ENST00000424379 260 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 TBCAP1-201ENST00000436520 327 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 RAB28P3-201ENST00000448325 597 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AL354710.1-201ENST00000453641 246 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 AC092691.2-201ENST00000461787 803 ntBASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PTPN20Q4JDL3 IGBP1P5-201ENST00000507524 1000 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms