Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX4Q06945 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SOX4Q06945 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX4Q06945 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 FRG1BP-201ENST00000278882 761 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 Y_RNA.1-201ENST00000352915 104 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 FRG1CP-201ENST00000358464 769 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 RNU6-462P-201ENST00000362659 105 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 SNORA51.1-201ENST00000363243 140 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX4Q06945 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX4Q06945 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 BX890604.2-201ENST00000427883 474 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 FCF1P1-201ENST00000432690 571 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 RPL21P110-201ENST00000433345 446 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC023141.8-201ENST00000442554 208 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 MTCO3P20-201ENST00000454926 688 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC023598.1-201ENST00000472521 361 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 AC111193.1-201ENST00000504097 155 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 KCTD9P5-201ENST00000504141 1170 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 AC010493.1-201ENST00000513479 292 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.27□□□□□ -1.41
SOX4Q06945 AC108064.1-201ENST00000513791 460 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 snoU109.5-201ENST00000516231 132 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 RNU6-1045P-201ENST00000516321 107 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC139365.2-201ENST00000517972 253 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 OR4A12P-201ENST00000530847 918 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX4Q06945 AC103710.4-201ENST00000609301 899 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AL352984.2-201ENST00000611153 546 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 AL365204.3-201ENST00000612448 685 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 AL160413.1-201ENST00000622780 310 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX4Q06945 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 AC138915.3-201ENST00000562908 1389 ntBASIC6.27□□□□□ -1.41
SOX4Q06945 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SOX4Q06945 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SOX4Q06945 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX4Q06945 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.27□□□□□ -1.41
SOX4Q06945 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.27□□□□□ -1.41
SOX4Q06945 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.27□□□□□ -1.41
SOX4Q06945 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX4Q06945 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX4Q06945 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SOX4Q06945 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX4Q06945 SNX18P3-202ENST00000565670 1750 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX4Q06945 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX4Q06945 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
SOX4Q06945 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX4Q06945 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SOX4Q06945 SNORA70H-201ENST00000383910 135 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 SNORA70J-201ENST00000384182 135 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 U8.14-201ENST00000390843 143 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 OR4F13P-201ENST00000428478 931 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 YWHAQP9-201ENST00000445891 512 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 AC108463.1-201ENST00000450258 347 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 SNRPGP6-201ENST00000451124 220 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX4Q06945 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX4Q06945 YWHAEP1-201ENST00000453697 763 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 RPL18AP17-201ENST00000455326 198 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC004129.2-201ENST00000457229 287 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AL445687.2-201ENST00000458156 728 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC009120.1-201ENST00000493458 473 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX4Q06945 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX4Q06945 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 AC011411.1-201ENST00000509592 876 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC048346.1-201ENST00000510247 144 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.26□□□□□ -1.41
SOX4Q06945 RNU6-327P-201ENST00000516270 127 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 RNA5SP135-201ENST00000517019 125 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SOX4Q06945 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 HPRT1P3-201ENST00000539521 576 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.26□□□□□ -1.41
SOX4Q06945 TRAV15-201ENST00000556680 249 ntBASIC6.26□□□□□ -1.41
SOX4Q06945 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.26□□□□□ -1.41
SOX4Q06945 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.26□□□□□ -1.41
SOX4Q06945 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.26□□□□□ -1.41
SOX4Q06945 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms