Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
UBE3AQ05086 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AL357515.1-201ENST00000402967 542 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 ZNF602P-201ENST00000405929 924 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 LINC00993-201ENST00000420453 540 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 AL732292.1-201ENST00000426692 226 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 AC004975.1-201ENST00000428733 208 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 ELOCP6-201ENST00000429066 328 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3AQ05086 ACTR3P2-201ENST00000439585 1257 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 MTCO1P53-201ENST00000441633 699 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3AQ05086 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC244505.3-201ENST00000454598 187 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 BX248409.1-201ENST00000455497 255 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 ZFRP1-201ENST00000457579 2970 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 ELOCP12-201ENST00000458706 328 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC073522.1-201ENST00000483312 377 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC083829.1-201ENST00000503756 657 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3AQ05086 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.13□□□□□ -1.59
UBE3AQ05086 NDUFS5P6-201ENST00000529136 295 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 LRRC6P1-201ENST00000532188 885 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC022884.2-201ENST00000578535 580 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 RN7SL290P-201ENST00000578661 300 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 MIR5699-201ENST00000578903 90 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3AQ05086 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3AQ05086 VN1R74P-201ENST00000613259 503 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 MIR6716-201ENST00000613413 80 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 AL121873.1-201ENST00000616013 524 ntBASIC5.13□□□□□ -1.59
UBE3AQ05086 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.13□□□□□ -1.59
UBE3AQ05086 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UBE3AQ05086 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.13□□□□□ -1.59
UBE3AQ05086 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UBE3AQ05086 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UBE3AQ05086 AC092376.2-201ENST00000622621 4116 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 AC009951.1-201ENST00000623674 2614 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.12□□□□□ -1.59
UBE3AQ05086 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.12□□□□□ -1.59
UBE3AQ05086 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 THAP12P5-201ENST00000405864 2275 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 USP9YP4-201ENST00000424401 1745 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 AL442639.1-201ENST00000625030 1899 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 FAM3C2-201ENST00000312214 681 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UBE3AQ05086 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UBE3AQ05086 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UBE3AQ05086 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 RN7SKP267-201ENST00000410381 285 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 MTCO2P8-201ENST00000412213 658 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 UQCRBP1-201ENST00000421129 336 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 MTCO2P23-201ENST00000425216 680 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AC114973.1-201ENST00000429057 632 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 MTCYBP15-201ENST00000433123 1127 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AL353597.2-202ENST00000434901 373 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 DUXAP8-207ENST00000456786 622 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 NIP7P2-201ENST00000485801 544 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 TRAV31-201ENST00000502780 342 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AC091860.1-201ENST00000505723 432 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE3AQ05086 IGJP1-201ENST00000522682 475 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE3AQ05086 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE3AQ05086 AC069061.3-201ENST00000582254 823 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 DUXAP10-204ENST00000612052 616 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AC018926.3-201ENST00000618841 406 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AL035461.2-201ENST00000619201 524 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 AC091046.2-201ENST00000620775 665 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.12□□□□□ -1.59
UBE3AQ05086 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 MFSD8-220ENST00000641243 1422 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 AC120338.1-201ENST00000625074 1541 ntBASIC5.12□□□□□ -1.59
UBE3AQ05086 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UBE3AQ05086 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UBE3AQ05086 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE3AQ05086 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms