Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF542P-204ENST00000482727 1305 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 BRAFP1-201ENST00000445336 2703 ntBASIC4.78□□□□□ -1.64
RAE1P78406 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 RNU6-931P-201ENST00000363850 107 ntBASIC4.78□□□□□ -1.64
RAE1P78406 RNU6-621P-201ENST00000364752 109 ntBASIC4.78□□□□□ -1.64
RAE1P78406 RNU6-304P-201ENST00000364855 107 ntBASIC4.78□□□□□ -1.64
RAE1P78406 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RAE1P78406 RNU6-171P-201ENST00000384354 107 ntBASIC4.78□□□□□ -1.64
RAE1P78406 CTSL3P-202ENST00000412179 788 ntBASIC4.78□□□□□ -1.64
RAE1P78406 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 LUZP4P1-201ENST00000415420 344 ntBASIC4.78□□□□□ -1.64
RAE1P78406 ZNF885P-201ENST00000420174 1098 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 UBE2D3P4-201ENST00000441973 436 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AC012512.1-201ENST00000446594 718 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 COX6CP18-201ENST00000448769 222 ntBASIC4.78□□□□□ -1.64
RAE1P78406 NPM1P19-201ENST00000450070 712 ntBASIC4.78□□□□□ -1.64
RAE1P78406 IGHV5-78-201ENST00000450948 295 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 AC097484.1-201ENST00000471148 389 ntBASIC4.78□□□□□ -1.64
RAE1P78406 RN7SL222P-201ENST00000476452 299 ntBASIC4.78□□□□□ -1.64
RAE1P78406 BX284632.1-201ENST00000478218 541 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AC005912.1-201ENST00000495392 255 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AC048346.1-201ENST00000510247 144 ntBASIC4.78□□□□□ -1.64
RAE1P78406 RNU6-759P-201ENST00000516740 103 ntBASIC4.78□□□□□ -1.64
RAE1P78406 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 OR5AZ1P-201ENST00000527448 943 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.78□□□□□ -1.64
RAE1P78406 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.78□□□□□ -1.64
RAE1P78406 VN1R90P-201ENST00000595717 726 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AC105254.2-201ENST00000603636 436 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL163642.2-201ENST00000604722 1019 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AC004223.4-201ENST00000612426 332 ntBASIC4.78□□□□□ -1.64
RAE1P78406 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 AC116618.1-201ENST00000634617 774 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.78□□□□□ -1.64
RAE1P78406 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 AC125336.1-201ENST00000508893 2827 ntBASIC4.78□□□□□ -1.64
RAE1P78406 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAE1P78406 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
RAE1P78406 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.78□□□□□ -1.64
RAE1P78406 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.65
RAE1P78406 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 DBF4P1-201ENST00000412976 1892 ntBASIC4.77□□□□□ -1.65
RAE1P78406 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.77□□□□□ -1.65
RAE1P78406 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 AL391994.1-201ENST00000254724 282 ntBASIC4.77□□□□□ -1.65
RAE1P78406 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RAE1P78406 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.77□□□□□ -1.65
RAE1P78406 SNORA70.10-201ENST00000384515 134 ntBASIC4.77□□□□□ -1.65
RAE1P78406 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AL161449.1-201ENST00000414531 1199 ntBASIC4.77□□□□□ -1.65
RAE1P78406 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 AC019178.2-201ENST00000423595 505 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.77□□□□□ -1.65
RAE1P78406 MTCO3P5-201ENST00000433620 714 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 GTF3AP5-201ENST00000442645 697 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.77□□□□□ -1.65
RAE1P78406 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAE1P78406 AL034418.1-201ENST00000448675 860 ntBASIC4.77□□□□□ -1.65
RAE1P78406 RPS27AP8-201ENST00000452665 445 ntBASIC4.77□□□□□ -1.65
RAE1P78406 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms