Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC002044.3-201ENST00000623314 541 ntBASIC3.38□□□□□ -1.87
LSM3P62310 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LSM3P62310 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM3P62310 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM3P62310 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LSM3P62310 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM3P62310 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM3P62310 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM3P62310 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 RNA5SP235-201ENST00000365411 114 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
LSM3P62310 RPS26P8-201ENST00000393490 348 ntBASIC3.37□□□□□ -1.87
LSM3P62310 MORN2-202ENST00000409077 465 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 RPL23AP26-201ENST00000412728 464 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AL159169.1-201ENST00000421119 127 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC104837.2-201ENST00000427236 424 ntBASIC3.37□□□□□ -1.87
LSM3P62310 HIGD1AP12-201ENST00000427832 281 ntBASIC3.37□□□□□ -1.87
LSM3P62310 NDUFB1P1-201ENST00000435191 180 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM3P62310 RN7SL809P-201ENST00000482040 297 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM3P62310 AC099522.1-202ENST00000514718 367 ntBASIC3.37□□□□□ -1.87
LSM3P62310 RNA5SP34-201ENST00000516887 130 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM3P62310 MTND2P17-201ENST00000550281 688 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM3P62310 AC007424.1-203ENST00000554613 687 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.37□□□□□ -1.87
LSM3P62310 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM3P62310 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 AC005084.1-201ENST00000605160 304 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC090948.1-201ENST00000607464 549 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC067852.7-201ENST00000623270 535 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC021106.3-201ENST00000623925 531 ntBASIC3.37□□□□□ -1.87
LSM3P62310 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM3P62310 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LSM3P62310 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
LSM3P62310 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM3P62310 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
LSM3P62310 OR56B2P-202ENST00000641377 2453 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AP002001.2-201ENST00000529025 1469 ntBASIC3.36□□□□□ -1.87
LSM3P62310 CR382285.2-201ENST00000624662 1495 ntBASIC3.36□□□□□ -1.87
LSM3P62310 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM3P62310 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM3P62310 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM3P62310 MIR30E-201ENST00000362104 92 ntBASIC3.36□□□□□ -1.87
LSM3P62310 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
LSM3P62310 AL589994.1-201ENST00000404962 340 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RPS12P23-201ENST00000419579 400 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM3P62310 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM3P62310 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
LSM3P62310 HMGB3P8-201ENST00000449709 577 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AL133244.1-201ENST00000456007 258 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RPS20P4-201ENST00000461659 355 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RPS3AP41-201ENST00000462701 778 ntBASIC3.36□□□□□ -1.87
LSM3P62310 OR52A4P-201ENST00000472867 958 ntBASIC3.36□□□□□ -1.87
LSM3P62310 ACTG1P13-201ENST00000486987 1043 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RN7SL629P-201ENST00000489622 285 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RN7SL604P-201ENST00000492589 296 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RN7SL810P-201ENST00000493031 276 ntBASIC3.36□□□□□ -1.87
LSM3P62310 RAC1P2-201ENST00000511164 579 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM3P62310 VTA1P2-201ENST00000520205 911 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AC087369.1-201ENST00000520775 996 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AC109635.6-201ENST00000525487 1113 ntBASIC3.36□□□□□ -1.87
LSM3P62310 CYCSP29-201ENST00000533731 318 ntBASIC3.36□□□□□ -1.87
LSM3P62310 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
LSM3P62310 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM3P62310 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM3P62310 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM3P62310 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM3P62310 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM3P62310 AC091167.4-201ENST00000605079 184 ntBASIC3.36□□□□□ -1.87
LSM3P62310 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM3P62310 AC079684.1-201ENST00000621405 437 ntBASIC3.36□□□□□ -1.87
LSM3P62310 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM3P62310 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LSM3P62310 AL513302.2-201ENST00000562313 1842 ntBASIC3.35□□□□□ -1.87
LSM3P62310 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM3P62310 RPL5P19-201ENST00000404228 893 ntBASIC3.35□□□□□ -1.87
LSM3P62310 RNU4-25P-201ENST00000410569 230 ntBASIC3.35□□□□□ -1.87
LSM3P62310 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 RPL23AP27-201ENST00000415161 451 ntBASIC3.35□□□□□ -1.87
LSM3P62310 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM3P62310 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
LSM3P62310 BTG3P1-201ENST00000435859 716 ntBASIC3.35□□□□□ -1.87
LSM3P62310 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms