Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 FP325313.1-201ENST00000638228 703 ntBASIC3.67□□□□□ -1.82
ACTBP60709 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.67□□□□□ -1.82
ACTBP60709 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
ACTBP60709 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ACTBP60709 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ACTBP60709 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ACTBP60709 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
ACTBP60709 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
ACTBP60709 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.67□□□□□ -1.82
ACTBP60709 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.66□□□□□ -1.82
ACTBP60709 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.66□□□□□ -1.82
ACTBP60709 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.66□□□□□ -1.82
ACTBP60709 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.66□□□□□ -1.82
ACTBP60709 RPL36AP15-201ENST00000444514 266 ntBASIC3.66□□□□□ -1.82
ACTBP60709 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.66□□□□□ -1.82
ACTBP60709 RPL12P20-201ENST00000475538 479 ntBASIC3.66□□□□□ -1.82
ACTBP60709 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.66□□□□□ -1.82
ACTBP60709 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 AC067852.4-201ENST00000590314 478 ntBASIC3.66□□□□□ -1.82
ACTBP60709 AC103710.3-201ENST00000608157 948 ntBASIC3.66□□□□□ -1.82
ACTBP60709 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.66□□□□□ -1.82
ACTBP60709 AL136295.6-201ENST00000610486 658 ntBASIC3.66□□□□□ -1.82
ACTBP60709 AL161616.1-201ENST00000611867 286 ntBASIC3.66□□□□□ -1.82
ACTBP60709 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 AC025031.4-201ENST00000621248 3271 ntBASIC3.66□□□□□ -1.82
ACTBP60709 SYT14P1-202ENST00000600441 1448 ntBASIC3.66□□□□□ -1.82
ACTBP60709 USP8P1-201ENST00000494673 3183 ntBASIC3.66□□□□□ -1.82
ACTBP60709 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
ACTBP60709 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ACTBP60709 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ACTBP60709 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ACTBP60709 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ACTBP60709 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.65□□□□□ -1.82
ACTBP60709 BDP1P-201ENST00000582658 1990 ntBASIC3.65□□□□□ -1.82
ACTBP60709 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ACTBP60709 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ACTBP60709 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ACTBP60709 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ACTBP60709 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.65□□□□□ -1.83
ACTBP60709 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
ACTBP60709 RNU1-89P-201ENST00000384592 164 ntBASIC3.65□□□□□ -1.83
ACTBP60709 MIR585-201ENST00000384887 94 ntBASIC3.65□□□□□ -1.83
ACTBP60709 RNA5SP397-201ENST00000391323 118 ntBASIC3.65□□□□□ -1.83
ACTBP60709 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ACTBP60709 RPL37P18-201ENST00000411602 243 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.65□□□□□ -1.83
ACTBP60709 AL359265.2-201ENST00000434367 631 ntBASIC3.65□□□□□ -1.83
ACTBP60709 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.65□□□□□ -1.83
ACTBP60709 YWHAZP2-201ENST00000440317 728 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AL356535.1-201ENST00000440335 398 ntBASIC3.65□□□□□ -1.83
ACTBP60709 YWHAQP9-201ENST00000445891 512 ntBASIC3.65□□□□□ -1.83
ACTBP60709 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.65□□□□□ -1.83
ACTBP60709 AP000873.1-201ENST00000463987 400 ntBASIC3.65□□□□□ -1.83
ACTBP60709 RPL9P32-201ENST00000464118 620 ntBASIC3.65□□□□□ -1.83
ACTBP60709 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
ACTBP60709 AC069499.1-201ENST00000489433 509 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AC104164.2-201ENST00000496953 495 ntBASIC3.65□□□□□ -1.83
ACTBP60709 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.65□□□□□ -1.83
ACTBP60709 AP001960.1-201ENST00000506494 658 ntBASIC3.65□□□□□ -1.83
ACTBP60709 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
ACTBP60709 AC006064.5-201ENST00000541782 248 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.65□□□□□ -1.83
ACTBP60709 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.65□□□□□ -1.83
ACTBP60709 AL109741.3-201ENST00000561748 592 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.65□□□□□ -1.83
ACTBP60709 AC068020.1-201ENST00000594215 661 ntBASIC3.65□□□□□ -1.83
ACTBP60709 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.65□□□□□ -1.83
ACTBP60709 AC020910.2-201ENST00000603635 610 ntBASIC3.65□□□□□ -1.83
ACTBP60709 HMGB1P50-201ENST00000605814 607 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AC064801.1-201ENST00000612025 407 ntBASIC3.65□□□□□ -1.83
ACTBP60709 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.65□□□□□ -1.83
ACTBP60709 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.65□□□□□ -1.83
ACTBP60709 OR5AC4P-202ENST00000642086 985 ntBASIC3.65□□□□□ -1.83
ACTBP60709 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ACTBP60709 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ACTBP60709 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ACTBP60709 ERCC6-202ENST00000374127 1782 ntBASIC3.65□□□□□ -1.83
ACTBP60709 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.65□□□□□ -1.83
ACTBP60709 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
ACTBP60709 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.83
ACTBP60709 AC233968.1-201ENST00000611212 1300 ntBASIC3.65□□□□□ -1.83
ACTBP60709 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ACTBP60709 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.65□□□□□ -1.83
ACTBP60709 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms