Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 LYPLA1P1-201ENST00000434514 622 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.08□□□□□ -1.76
PKNOX1P55347 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.08□□□□□ -1.76
PKNOX1P55347 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.08□□□□□ -1.76
PKNOX1P55347 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 RPS20P4-201ENST00000461659 355 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.08□□□□□ -1.76
PKNOX1P55347 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.08□□□□□ -1.76
PKNOX1P55347 RPL23AP2-201ENST00000471227 466 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 AC093770.1-201ENST00000511559 571 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 RNU6-347P-201ENST00000516658 105 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 DEFB109D-201ENST00000529497 240 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
PKNOX1P55347 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PKNOX1P55347 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.08□□□□□ -1.76
PKNOX1P55347 AL132640.2-201ENST00000559968 1698 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.08□□□□□ -1.76
PKNOX1P55347 AC093765.1-201ENST00000603758 881 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 FAM27D1-201ENST00000612308 341 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PKNOX1P55347 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 AL445363.3-201ENST00000623080 671 ntBASIC4.08□□□□□ -1.76
PKNOX1P55347 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PKNOX1P55347 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
PKNOX1P55347 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PKNOX1P55347 AC093311.1-201ENST00000506586 2021 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 RNU1-14P-201ENST00000362759 152 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.07□□□□□ -1.76
PKNOX1P55347 RNU6-1279P-201ENST00000383917 103 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 SNORA37-201ENST00000384504 129 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 RNU6-244P-201ENST00000391028 104 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 RN7SKP235-201ENST00000410662 305 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 RAC1P3-201ENST00000416129 580 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AL590139.1-201ENST00000416267 400 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 MFSD13B-201ENST00000420133 1290 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AC007394.1-201ENST00000421941 531 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 RPL12P34-201ENST00000424532 479 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 RPL12P28-201ENST00000430852 489 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC114878.1-201ENST00000441166 358 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 TPTE2P3-201ENST00000441562 1189 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.07□□□□□ -1.76
PKNOX1P55347 EEF1A1P1-201ENST00000447052 739 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 MTND2P25-201ENST00000449028 610 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PKNOX1P55347 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.07□□□□□ -1.76
PKNOX1P55347 RPS27AP16-201ENST00000492222 470 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 RN7SKP92-201ENST00000517266 244 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 OR8G5-201ENST00000524943 1041 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.07□□□□□ -1.76
PKNOX1P55347 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC023158.1-201ENST00000561632 1025 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.07□□□□□ -1.76
PKNOX1P55347 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AL133247.2-201ENST00000603236 482 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AL021707.7-201ENST00000607991 416 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AL035461.2-201ENST00000619201 524 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC103858.2-201ENST00000621471 543 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AL359715.5-201ENST00000623431 443 ntBASIC4.07□□□□□ -1.76
PKNOX1P55347 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PKNOX1P55347 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.07□□□□□ -1.76
PKNOX1P55347 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKNOX1P55347 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PKNOX1P55347 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PKNOX1P55347 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKNOX1P55347 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.06□□□□□ -1.76
PKNOX1P55347 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PKNOX1P55347 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKNOX1P55347 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKNOX1P55347 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PKNOX1P55347 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKNOX1P55347 FAM3C2-201ENST00000312214 681 ntBASIC4.06□□□□□ -1.76
PKNOX1P55347 SNORA27.3-201ENST00000364937 134 ntBASIC4.06□□□□□ -1.76
PKNOX1P55347 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PKNOX1P55347 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PKNOX1P55347 RNA5SP36-201ENST00000410197 133 ntBASIC4.06□□□□□ -1.76
PKNOX1P55347 AL139128.1-201ENST00000413921 941 ntBASIC4.06□□□□□ -1.76
PKNOX1P55347 AC119751.6-201ENST00000416712 186 ntBASIC4.06□□□□□ -1.76
PKNOX1P55347 VDAC1P6-201ENST00000430062 855 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms