Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC068254.2-201ENST00000623938 3577 ntBASIC4.01□□□□□ -1.77
LIM2P55344 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
LIM2P55344 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LIM2P55344 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LIM2P55344 FAM3C2-201ENST00000312214 681 ntBASIC4□□□□□ -1.77
LIM2P55344 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
LIM2P55344 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 RHOT1P2-201ENST00000366423 333 ntBASIC4□□□□□ -1.77
LIM2P55344 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4□□□□□ -1.77
LIM2P55344 RNU6-185P-201ENST00000384421 107 ntBASIC4□□□□□ -1.77
LIM2P55344 TAF9BP2-201ENST00000400856 499 ntBASIC4□□□□□ -1.77
LIM2P55344 MIR1179-201ENST00000408703 91 ntBASIC4□□□□□ -1.77
LIM2P55344 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4□□□□□ -1.77
LIM2P55344 AC009302.1-201ENST00000417147 390 ntBASIC4□□□□□ -1.77
LIM2P55344 ARL4AP4-201ENST00000434170 518 ntBASIC4□□□□□ -1.77
LIM2P55344 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4□□□□□ -1.77
LIM2P55344 AL691517.1-201ENST00000440833 1235 ntBASIC4□□□□□ -1.77
LIM2P55344 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4□□□□□ -1.77
LIM2P55344 AC099063.2-201ENST00000446360 662 ntBASIC4□□□□□ -1.77
LIM2P55344 RPL7AP52-201ENST00000458096 790 ntBASIC4□□□□□ -1.77
LIM2P55344 RPS29P19-201ENST00000479709 171 ntBASIC4□□□□□ -1.77
LIM2P55344 SYT14P1-201ENST00000481459 721 ntBASIC4□□□□□ -1.77
LIM2P55344 AC091167.1-201ENST00000492017 396 ntBASIC4□□□□□ -1.77
LIM2P55344 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4□□□□□ -1.77
LIM2P55344 BNIP3P41-201ENST00000503774 571 ntBASIC4□□□□□ -1.77
LIM2P55344 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 AC108475.1-201ENST00000507880 950 ntBASIC4□□□□□ -1.77
LIM2P55344 PGBD4P4-201ENST00000509673 613 ntBASIC4□□□□□ -1.77
LIM2P55344 OR51K1P-201ENST00000510214 950 ntBASIC4□□□□□ -1.77
LIM2P55344 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
LIM2P55344 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4□□□□□ -1.77
LIM2P55344 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4□□□□□ -1.77
LIM2P55344 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 EIF4A2P1-201ENST00000587313 1063 ntBASIC4□□□□□ -1.77
LIM2P55344 IPO5P1-202ENST00000600039 287 ntBASIC4□□□□□ -1.77
LIM2P55344 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 AL161729.3-201ENST00000603533 673 ntBASIC4□□□□□ -1.77
LIM2P55344 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4□□□□□ -1.77
LIM2P55344 MIR3653-201ENST00000625572 110 ntBASIC4□□□□□ -1.77
LIM2P55344 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4□□□□□ -1.77
LIM2P55344 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LIM2P55344 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4□□□□□ -1.77
LIM2P55344 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4□□□□□ -1.77
LIM2P55344 BTBD10P1-201ENST00000549824 1352 ntBASIC4□□□□□ -1.77
LIM2P55344 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
LIM2P55344 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4□□□□□ -1.77
LIM2P55344 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LIM2P55344 AC015813.6-201ENST00000624409 5808 ntBASIC3.99□□□□□ -1.77
LIM2P55344 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 MAPK10-253ENST00000641010 4072 ntBASIC3.99□□□□□ -1.77
LIM2P55344 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.99□□□□□ -1.77
LIM2P55344 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.99□□□□□ -1.77
LIM2P55344 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 OR6C69P-201ENST00000394268 893 ntBASIC3.99□□□□□ -1.77
LIM2P55344 HMGB1P10-201ENST00000395823 563 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AL161909.1-201ENST00000397390 712 ntBASIC3.99□□□□□ -1.77
LIM2P55344 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.99□□□□□ -1.77
LIM2P55344 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.99□□□□□ -1.77
LIM2P55344 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.99□□□□□ -1.77
LIM2P55344 DPY19L1P2-201ENST00000426647 915 ntBASIC3.99□□□□□ -1.77
LIM2P55344 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 HMGB1P5-202ENST00000451497 985 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AL354710.1-201ENST00000453641 246 ntBASIC3.99□□□□□ -1.77
LIM2P55344 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.99□□□□□ -1.77
LIM2P55344 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.99□□□□□ -1.77
LIM2P55344 RNU7-27P-201ENST00000459281 62 ntBASIC3.99□□□□□ -1.77
LIM2P55344 RPL5P30-201ENST00000465511 891 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
LIM2P55344 UQCRHP4-201ENST00000471686 272 ntBASIC3.99□□□□□ -1.77
LIM2P55344 NDUFA5P9-201ENST00000472609 340 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.99□□□□□ -1.77
LIM2P55344 AC025459.1-201ENST00000504072 156 ntBASIC3.99□□□□□ -1.77
LIM2P55344 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 HPRT1P1-201ENST00000509498 657 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.99□□□□□ -1.77
LIM2P55344 MYL12AP1-201ENST00000518490 515 ntBASIC3.99□□□□□ -1.77
LIM2P55344 OR5M7P-201ENST00000526140 972 ntBASIC3.99□□□□□ -1.77
LIM2P55344 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.99□□□□□ -1.77
LIM2P55344 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.99□□□□□ -1.77
LIM2P55344 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.99□□□□□ -1.77
LIM2P55344 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.99□□□□□ -1.77
LIM2P55344 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.99□□□□□ -1.77
LIM2P55344 KPNA2P3-201ENST00000584190 848 ntBASIC3.99□□□□□ -1.77
LIM2P55344 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.99□□□□□ -1.77
LIM2P55344 AC008638.3-201ENST00000603341 463 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.99□□□□□ -1.77
LIM2P55344 AC012557.1-201ENST00000607115 611 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.99□□□□□ -1.77
LIM2P55344 AC110792.4-201ENST00000609843 298 ntBASIC3.99□□□□□ -1.77
LIM2P55344 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms