Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MTCO1P54-201ENST00000430139 712 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGCS2P54868 BTBD7P2-201ENST00000441962 620 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 AC012158.1-204ENST00000483430 465 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGCS2P54868 MTND2P31-201ENST00000512602 616 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 RN7SKP157-201ENST00000516174 282 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 MTND2P7-201ENST00000521337 640 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 LSM3P2-201ENST00000551246 273 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.68□□□□□ -1.66
HMGCS2P54868 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS2P54868 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 AC096553.1-201ENST00000605169 829 ntBASIC4.68□□□□□ -1.66
HMGCS2P54868 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.68□□□□□ -1.66
HMGCS2P54868 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HMGCS2P54868 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.68□□□□□ -1.66
HMGCS2P54868 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
HMGCS2P54868 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS2P54868 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.67□□□□□ -1.66
HMGCS2P54868 OR5T3-201ENST00000303059 1023 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 U8.11-201ENST00000384699 133 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 U8.12-201ENST00000384701 133 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 MTND3P20-201ENST00000407663 186 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AL450992.3-201ENST00000413192 568 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 OR51A6P-201ENST00000418680 1004 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS2P54868 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS2P54868 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS2P54868 AL050321.1-201ENST00000432363 400 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 Z85994.2-201ENST00000434327 452 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AC002553.2-201ENST00000453217 340 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 U8.18-201ENST00000459285 133 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 HMGN1P8-201ENST00000463578 288 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 RNU7-143P-201ENST00000516781 65 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 RNA5SP179-201ENST00000517284 121 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGCS2P54868 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGCS2P54868 CYCSP30-201ENST00000546447 172 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AC091516.1-201ENST00000549191 703 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AC008759.1-201ENST00000589783 983 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 AC091167.4-201ENST00000605079 184 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 ZNF285B-201ENST00000561698 1767 ntBASIC4.67□□□□□ -1.66
HMGCS2P54868 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGCS2P54868 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS2P54868 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 Y_RNA.62-201ENST00000362840 99 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 MIR195-201ENST00000385194 87 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS2P54868 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS2P54868 RPL23AP89-201ENST00000439324 255 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGCS2P54868 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 MTND2P3-201ENST00000452458 470 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 MTND3P4-201ENST00000453537 303 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 RPL7P15-201ENST00000461190 712 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 OR52A4P-202ENST00000481634 799 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HMGCS2P54868 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS2P54868 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS2P54868 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS2P54868 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.66□□□□□ -1.66
HMGCS2P54868 CCNG2P1-201ENST00000549521 1000 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGCS2P54868 MTND2P13-201ENST00000577438 1039 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 AC087499.8-201ENST00000578406 226 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 AC012417.1-201ENST00000582307 1039 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS2P54868 AL135786.2-201ENST00000608422 615 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGCS2P54868 AC104820.1-201ENST00000624183 307 ntBASIC4.66□□□□□ -1.66
HMGCS2P54868 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
HMGCS2P54868 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGCS2P54868 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS2P54868 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.65□□□□□ -1.66
HMGCS2P54868 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HMGCS2P54868 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.65□□□□□ -1.66
HMGCS2P54868 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms