Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 Y_RNA.9-201ENST00000362354 101 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 Y_RNA.38-201ENST00000362617 102 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 RNU6-692P-201ENST00000384496 107 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 Y_RNA.509-201ENST00000384506 99 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 MT-TD-201ENST00000387419 68 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
EPHB3P54753 LINC01347-201ENST00000417964 355 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 RNF10P1-201ENST00000418589 369 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 OFD1P18Y-201ENST00000420889 959 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 AC233728.2-201ENST00000425348 757 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 TMEM183AP1-205ENST00000432739 290 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 MTND5P14-201ENST00000441481 1267 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 OR6C5P-201ENST00000452388 923 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 ARL2BPP6-201ENST00000512757 439 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 YWHABP2-201ENST00000540201 713 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AC092747.2-201ENST00000545069 983 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 HAUS8P1-201ENST00000549005 542 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC044860.2-201ENST00000561005 179 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.84□□□□□ -1.47
EPHB3P54753 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 H3F3BP2-201ENST00000583907 357 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.84□□□□□ -1.47
EPHB3P54753 AC012065.4-201ENST00000602445 679 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.84□□□□□ -1.47
EPHB3P54753 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.84□□□□□ -1.47
EPHB3P54753 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 AL079343.1-201ENST00000572358 1771 ntBASIC5.84□□□□□ -1.47
EPHB3P54753 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
EPHB3P54753 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
EPHB3P54753 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
EPHB3P54753 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
EPHB3P54753 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
EPHB3P54753 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.84□□□□□ -1.48
EPHB3P54753 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
EPHB3P54753 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
EPHB3P54753 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHB3P54753 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 AC109780.1-201ENST00000451768 1344 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 AL356057.2-201ENST00000403318 432 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 RNU2-65P-201ENST00000410162 185 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 DPPA2P3-201ENST00000411853 655 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHB3P54753 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 GDI2P2-201ENST00000445131 608 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC105399.1-202ENST00000447303 205 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 Z99127.3-201ENST00000448158 395 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 RPS21P4-201ENST00000487122 248 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 AC109462.1-201ENST00000491087 368 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 AC069439.1-201ENST00000494739 167 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 NDUFA5P12-201ENST00000503796 343 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
EPHB3P54753 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.83□□□□□ -1.48
EPHB3P54753 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
EPHB3P54753 ATP5F1P7-201ENST00000567330 760 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms