Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MIR130A-201ENST00000385274 89 ntBASIC6.49□□□□□ -1.37
USP11P51784 MTCO3P40-201ENST00000392516 676 ntBASIC6.49□□□□□ -1.37
USP11P51784 RN7SKP285-201ENST00000410137 318 ntBASIC6.49□□□□□ -1.37
USP11P51784 RPL17P12-201ENST00000413391 526 ntBASIC6.49□□□□□ -1.37
USP11P51784 BMS1P17-202ENST00000416720 316 ntBASIC6.49□□□□□ -1.37
USP11P51784 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.49□□□□□ -1.37
USP11P51784 AL662874.1-201ENST00000426065 230 ntBASIC6.49□□□□□ -1.37
USP11P51784 AL590399.2-201ENST00000427536 309 ntBASIC6.49□□□□□ -1.37
USP11P51784 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.49□□□□□ -1.37
USP11P51784 USP9YP9-201ENST00000429406 715 ntBASIC6.49□□□□□ -1.37
USP11P51784 FAM96AP1-201ENST00000430879 482 ntBASIC6.49□□□□□ -1.37
USP11P51784 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.49□□□□□ -1.37
USP11P51784 MTCYBP45-201ENST00000435243 565 ntBASIC6.49□□□□□ -1.37
USP11P51784 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.49□□□□□ -1.37
USP11P51784 AC064862.4-201ENST00000442180 334 ntBASIC6.49□□□□□ -1.37
USP11P51784 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.49□□□□□ -1.37
USP11P51784 MEMO1P4-201ENST00000453590 386 ntBASIC6.49□□□□□ -1.37
USP11P51784 NXT1P1-201ENST00000458481 316 ntBASIC6.49□□□□□ -1.37
USP11P51784 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
USP11P51784 AP000797.1-201ENST00000478870 387 ntBASIC6.49□□□□□ -1.37
USP11P51784 RN7SL273P-201ENST00000481561 299 ntBASIC6.49□□□□□ -1.37
USP11P51784 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.49□□□□□ -1.37
USP11P51784 AC114786.4-201ENST00000508771 728 ntBASIC6.49□□□□□ -1.37
USP11P51784 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.49□□□□□ -1.37
USP11P51784 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.49□□□□□ -1.37
USP11P51784 RNU6-1308P-201ENST00000516817 103 ntBASIC6.49□□□□□ -1.37
USP11P51784 SNORA43.3-201ENST00000517240 103 ntBASIC6.49□□□□□ -1.37
USP11P51784 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.49□□□□□ -1.37
USP11P51784 AC083923.1-201ENST00000523708 376 ntBASIC6.49□□□□□ -1.37
USP11P51784 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.49□□□□□ -1.37
USP11P51784 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.49□□□□□ -1.37
USP11P51784 AL442663.2-201ENST00000554385 511 ntBASIC6.49□□□□□ -1.37
USP11P51784 AL391840.1-201ENST00000571144 367 ntBASIC6.49□□□□□ -1.37
USP11P51784 AC020914.6-201ENST00000594327 272 ntBASIC6.49□□□□□ -1.37
USP11P51784 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.49□□□□□ -1.37
USP11P51784 BNIP3P4-201ENST00000604946 565 ntBASIC6.49□□□□□ -1.37
USP11P51784 TAS2R6P-201ENST00000605022 826 ntBASIC6.49□□□□□ -1.37
USP11P51784 AL162730.1-201ENST00000605734 292 ntBASIC6.49□□□□□ -1.37
USP11P51784 AC107214.2-201ENST00000608204 634 ntBASIC6.49□□□□□ -1.37
USP11P51784 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USP11P51784 AC024023.1-201ENST00000624530 922 ntBASIC6.49□□□□□ -1.37
USP11P51784 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
USP11P51784 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.49□□□□□ -1.37
USP11P51784 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
USP11P51784 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
USP11P51784 AC003985.2-201ENST00000562268 1669 ntBASIC6.49□□□□□ -1.37
USP11P51784 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
USP11P51784 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP11P51784 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.48□□□□□ -1.37
USP11P51784 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 Z99496.1-201ENST00000469424 1477 ntBASIC6.48□□□□□ -1.37
USP11P51784 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP11P51784 RPL21P132-201ENST00000331267 462 ntBASIC6.48□□□□□ -1.37
USP11P51784 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
USP11P51784 RNA5SP46-201ENST00000362370 120 ntBASIC6.48□□□□□ -1.37
USP11P51784 SNORA40.3-201ENST00000390964 122 ntBASIC6.48□□□□□ -1.37
USP11P51784 FAT1P1-201ENST00000406588 507 ntBASIC6.48□□□□□ -1.37
USP11P51784 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.48□□□□□ -1.37
USP11P51784 AIMP1P1-201ENST00000418670 937 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC069157.1-201ENST00000421749 137 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 HMGN1P36-201ENST00000446623 298 ntBASIC6.48□□□□□ -1.37
USP11P51784 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
USP11P51784 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 COX6CP18-201ENST00000448769 222 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 OR6K1P-201ENST00000456766 971 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC090013.1-201ENST00000485147 480 ntBASIC6.48□□□□□ -1.37
USP11P51784 DUTP1-201ENST00000493631 470 ntBASIC6.48□□□□□ -1.37
USP11P51784 DYNLL1P6-201ENST00000503440 264 ntBASIC6.48□□□□□ -1.37
USP11P51784 IGLVIV-64-201ENST00000518581 301 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC022832.1-201ENST00000530718 645 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC010547.6-201ENST00000571789 193 ntBASIC6.48□□□□□ -1.37
USP11P51784 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.48□□□□□ -1.37
USP11P51784 BNIP3P11-201ENST00000603878 563 ntBASIC6.48□□□□□ -1.37
USP11P51784 AL161729.4-201ENST00000604650 476 ntBASIC6.48□□□□□ -1.37
USP11P51784 AL442067.2-201ENST00000614033 363 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC009233.1-201ENST00000616477 371 ntBASIC6.48□□□□□ -1.37
USP11P51784 AL359880.1-201ENST00000621879 266 ntBASIC6.48□□□□□ -1.37
USP11P51784 AC015871.5-202ENST00000623252 701 ntBASIC6.48□□□□□ -1.37
USP11P51784 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP11P51784 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
USP11P51784 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP11P51784 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
USP11P51784 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.48□□□□□ -1.37
USP11P51784 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms