Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC008759.1-201ENST00000589783 983 ntBASIC4.8□□□□□ -1.64
GPC3P51654 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC3P51654 AL133247.2-201ENST00000603236 482 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AL354984.3-201ENST00000604803 325 ntBASIC4.8□□□□□ -1.64
GPC3P51654 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC3P51654 AC123768.4-201ENST00000616244 701 ntBASIC4.8□□□□□ -1.64
GPC3P51654 LINC00216-201ENST00000623548 1126 ntBASIC4.8□□□□□ -1.64
GPC3P51654 AC116563.2-201ENST00000624751 535 ntBASIC4.8□□□□□ -1.64
GPC3P51654 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
GPC3P51654 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
GPC3P51654 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.79□□□□□ -1.64
GPC3P51654 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
GPC3P51654 AC005261.4-201ENST00000600047 1385 ntBASIC4.79□□□□□ -1.64
GPC3P51654 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 AC093311.1-201ENST00000506586 2021 ntBASIC4.79□□□□□ -1.64
GPC3P51654 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 RNA5SP515-201ENST00000364570 118 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AL161909.1-201ENST00000397390 712 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC3P51654 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC3P51654 UBTFL3-201ENST00000418934 1024 ntBASIC4.79□□□□□ -1.64
GPC3P51654 IPMKP1-201ENST00000425988 855 ntBASIC4.79□□□□□ -1.64
GPC3P51654 RPS24P8-201ENST00000431490 402 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.79□□□□□ -1.64
GPC3P51654 RPS27AP15-201ENST00000447672 466 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.79□□□□□ -1.64
GPC3P51654 AC005008.1-201ENST00000456151 612 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC006511.1-201ENST00000470614 315 ntBASIC4.79□□□□□ -1.64
GPC3P51654 UBTFL6-201ENST00000477929 1024 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC012158.1-204ENST00000483430 465 ntBASIC4.79□□□□□ -1.64
GPC3P51654 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.79□□□□□ -1.64
GPC3P51654 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC3P51654 TCP11X3P-202ENST00000514289 1254 ntBASIC4.79□□□□□ -1.64
GPC3P51654 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC3P51654 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC3P51654 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.79□□□□□ -1.64
GPC3P51654 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC3P51654 AC007224.1-201ENST00000564410 144 ntBASIC4.79□□□□□ -1.64
GPC3P51654 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC3P51654 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC3P51654 AL160290.3-201ENST00000604869 165 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC025175.1-201ENST00000606482 759 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC023043.4-201ENST00000612081 449 ntBASIC4.79□□□□□ -1.64
GPC3P51654 AC074276.2-201ENST00000619891 348 ntBASIC4.79□□□□□ -1.64
GPC3P51654 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC3P51654 AC007546.2-201ENST00000623996 360 ntBASIC4.79□□□□□ -1.64
GPC3P51654 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.79□□□□□ -1.64
GPC3P51654 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC3P51654 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC3P51654 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
GPC3P51654 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC3P51654 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GPC3P51654 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC3P51654 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GPC3P51654 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GPC3P51654 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC3P51654 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GPC3P51654 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC3P51654 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC3P51654 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC3P51654 RNU6-185P-201ENST00000384421 107 ntBASIC4.78□□□□□ -1.64
GPC3P51654 MIR708-201ENST00000390708 88 ntBASIC4.78□□□□□ -1.64
GPC3P51654 MIR1193-201ENST00000408109 78 ntBASIC4.78□□□□□ -1.64
GPC3P51654 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.78□□□□□ -1.64
GPC3P51654 MFSD13B-201ENST00000420133 1290 ntBASIC4.78□□□□□ -1.64
GPC3P51654 AL138785.1-201ENST00000425821 331 ntBASIC4.78□□□□□ -1.64
GPC3P51654 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GPC3P51654 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC3P51654 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 RPL35AP15-201ENST00000468042 339 ntBASIC4.78□□□□□ -1.64
GPC3P51654 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 AC021146.3-201ENST00000511911 260 ntBASIC4.78□□□□□ -1.64
GPC3P51654 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 MTCO1P35-201ENST00000515270 228 ntBASIC4.78□□□□□ -1.64
GPC3P51654 RNU6-760P-201ENST00000516078 97 ntBASIC4.78□□□□□ -1.64
GPC3P51654 RNA5SP49-201ENST00000516450 115 ntBASIC4.78□□□□□ -1.64
GPC3P51654 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC3P51654 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC3P51654 MIR4512-201ENST00000583257 77 ntBASIC4.78□□□□□ -1.64
GPC3P51654 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC3P51654 AL355816.1-201ENST00000607951 118 ntBASIC4.78□□□□□ -1.64
GPC3P51654 AC243654.2-201ENST00000612843 443 ntBASIC4.78□□□□□ -1.64
GPC3P51654 AL021997.2-201ENST00000615674 271 ntBASIC4.78□□□□□ -1.64
GPC3P51654 CFTRP2-201ENST00000634304 199 ntBASIC4.78□□□□□ -1.64
GPC3P51654 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC3P51654 FP325313.1-201ENST00000638228 703 ntBASIC4.78□□□□□ -1.64
GPC3P51654 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC3P51654 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC3P51654 NOL8P1-201ENST00000508336 3529 ntBASIC4.78□□□□□ -1.64
GPC3P51654 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms