Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 NACA3P-201ENST00000359690 648 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 RNU1-20P-201ENST00000363314 162 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 RNU1-74P-201ENST00000384108 171 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AL596448.1-201ENST00000415024 392 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 MTND5P25-201ENST00000430499 799 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC073143.1-201ENST00000436316 395 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 HMGN1P2-201ENST00000445197 310 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 ART2BP-201ENST00000453501 499 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 NDUFA5P5-201ENST00000468361 342 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AL035404.1-201ENST00000497982 568 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 IGLVIV-64-201ENST00000518581 301 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 NANOGNBP2-201ENST00000544753 553 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.16□□□□□ -1.74
HOXA1P49639 BLZF2P-201ENST00000553776 1130 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AADACP1-206ENST00000561502 1193 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC015720.2-201ENST00000567709 334 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC010547.6-201ENST00000571789 193 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 MTND4LP24-201ENST00000572277 291 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AC008814.1-201ENST00000603797 406 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
HOXA1P49639 AL021707.7-201ENST00000607991 416 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC000068.2-201ENST00000608816 460 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC105227.2-201ENST00000615075 605 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 U6.48-201ENST00000618523 106 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 AC067852.7-201ENST00000623270 535 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 CU639417.4-201ENST00000623928 207 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 OR1S1-201ENST00000624470 978 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA1P49639 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA1P49639 NSRP1P1-201ENST00000444067 1693 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 VPS35P1-201ENST00000563400 1518 ntBASIC4.16□□□□□ -1.74
HOXA1P49639 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
HOXA1P49639 OR13C1P-202ENST00000641378 2919 ntBASIC4.15□□□□□ -1.74
HOXA1P49639 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA1P49639 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HOXA1P49639 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
HOXA1P49639 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA1P49639 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.15□□□□□ -1.74
HOXA1P49639 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
HOXA1P49639 AL672167.1-205ENST00000641112 3080 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HOXA1P49639 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HOXA1P49639 RNA5SP52-201ENST00000362448 134 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 RNU6-707P-201ENST00000364647 95 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA1P49639 RNU6-413P-201ENST00000384115 107 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 AC119751.3-201ENST00000399720 670 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 SNORA11C-201ENST00000408532 129 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 RNU6-77P-201ENST00000410554 91 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA1P49639 BMS1P17-202ENST00000416720 316 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 TMBIM7P-201ENST00000418074 855 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA1P49639 AC048351.1-201ENST00000420064 602 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 AL365338.1-201ENST00000422282 858 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 AL391219.1-201ENST00000422570 483 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.15□□□□□ -1.75
HOXA1P49639 OR5AW1P-201ENST00000426334 1006 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA1P49639 AC005033.1-201ENST00000428904 813 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.15□□□□□ -1.75
HOXA1P49639 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA1P49639 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.15□□□□□ -1.75
HOXA1P49639 COX7BP2-201ENST00000437976 242 ntBASIC4.15□□□□□ -1.75
HOXA1P49639 RPS29P10-201ENST00000439197 166 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms