Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Z85994.2-201ENST00000434327 452 ntBASIC3.96□□□□□ -1.78
RFC3P40938 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.96□□□□□ -1.78
RFC3P40938 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.96□□□□□ -1.78
RFC3P40938 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.96□□□□□ -1.78
RFC3P40938 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 RNU6-1218P-201ENST00000458990 108 ntBASIC3.96□□□□□ -1.78
RFC3P40938 RPL5P13-201ENST00000462840 709 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AC020898.1-201ENST00000474167 787 ntBASIC3.96□□□□□ -1.78
RFC3P40938 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 ATG10-AS1-201ENST00000504846 648 ntBASIC3.96□□□□□ -1.78
RFC3P40938 HNRNPKP5-201ENST00000515300 253 ntBASIC3.96□□□□□ -1.78
RFC3P40938 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AC100770.1-201ENST00000532310 322 ntBASIC3.96□□□□□ -1.78
RFC3P40938 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.96□□□□□ -1.78
RFC3P40938 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.96□□□□□ -1.78
RFC3P40938 AC084824.1-201ENST00000550917 1005 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 AC025884.1-201ENST00000556034 378 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.96□□□□□ -1.78
RFC3P40938 AL591034.3-201ENST00000605511 685 ntBASIC3.96□□□□□ -1.78
RFC3P40938 Z98200.1-201ENST00000607298 470 ntBASIC3.96□□□□□ -1.78
RFC3P40938 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 AC005021.1-201ENST00000608730 355 ntBASIC3.96□□□□□ -1.78
RFC3P40938 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.96□□□□□ -1.78
RFC3P40938 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.96□□□□□ -1.78
RFC3P40938 AL445363.3-201ENST00000623080 671 ntBASIC3.96□□□□□ -1.78
RFC3P40938 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.96□□□□□ -1.78
RFC3P40938 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.96□□□□□ -1.78
RFC3P40938 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFC3P40938 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 AC125257.1-201ENST00000560400 2930 ntBASIC3.95□□□□□ -1.78
RFC3P40938 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.95□□□□□ -1.78
RFC3P40938 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.95□□□□□ -1.78
RFC3P40938 LARP1BP1-201ENST00000506036 1359 ntBASIC3.95□□□□□ -1.78
RFC3P40938 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 MIR513A2-201ENST00000385249 127 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AL161909.1-201ENST00000397390 712 ntBASIC3.95□□□□□ -1.78
RFC3P40938 SNORA11F-201ENST00000408237 128 ntBASIC3.95□□□□□ -1.78
RFC3P40938 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
RFC3P40938 RN7SKP263-201ENST00000411194 309 ntBASIC3.95□□□□□ -1.78
RFC3P40938 BTF3P9-201ENST00000418784 283 ntBASIC3.95□□□□□ -1.78
RFC3P40938 YWHAEP5-201ENST00000431545 765 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 RPEP2-201ENST00000432149 701 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC114755.5-201ENST00000447760 831 ntBASIC3.95□□□□□ -1.78
RFC3P40938 NDUFS5P3-201ENST00000450668 321 ntBASIC3.95□□□□□ -1.78
RFC3P40938 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 AL133477.1-201ENST00000457472 514 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.95□□□□□ -1.78
RFC3P40938 RPL7P22-201ENST00000466005 733 ntBASIC3.95□□□□□ -1.78
RFC3P40938 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RFC3P40938 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.95□□□□□ -1.78
RFC3P40938 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.95□□□□□ -1.78
RFC3P40938 AC008958.1-201ENST00000511047 682 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.95□□□□□ -1.78
RFC3P40938 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.95□□□□□ -1.78
RFC3P40938 AC018797.3-201ENST00000513388 1241 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC034244.2-201ENST00000514668 858 ntBASIC3.95□□□□□ -1.78
RFC3P40938 RNA5SP446-201ENST00000515955 82 ntBASIC3.95□□□□□ -1.78
RFC3P40938 RNA5SP49-201ENST00000516450 115 ntBASIC3.95□□□□□ -1.78
RFC3P40938 RNA5SP519-201ENST00000516480 119 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.95□□□□□ -1.78
RFC3P40938 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.95□□□□□ -1.78
RFC3P40938 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.95□□□□□ -1.78
RFC3P40938 MIR3160-1-201ENST00000577972 85 ntBASIC3.95□□□□□ -1.78
RFC3P40938 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 AC090953.1-201ENST00000604305 1092 ntBASIC3.95□□□□□ -1.78
RFC3P40938 HMGB1P51-201ENST00000605166 638 ntBASIC3.95□□□□□ -1.78
RFC3P40938 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.95□□□□□ -1.78
RFC3P40938 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 AC067852.7-201ENST00000623270 535 ntBASIC3.95□□□□□ -1.78
RFC3P40938 FP325313.1-201ENST00000638228 703 ntBASIC3.95□□□□□ -1.78
RFC3P40938 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RFC3P40938 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFC3P40938 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.94□□□□□ -1.78
RFC3P40938 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms