Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 SNORA74C-2-201ENST00000411179 201 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 TPT1P2-201ENST00000413105 503 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 BX119904.1-201ENST00000432026 348 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AL035458.1-201ENST00000433096 585 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 RPS27P5-201ENST00000444247 244 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 RPL7P22-201ENST00000466005 733 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AC016550.1-201ENST00000505348 785 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.33□□□□□ -1.56
TM4SF1P30408 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 TRMT10BP1-201ENST00000519377 943 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 AC090079.2-201ENST00000575289 768 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 TMF1P1-201ENST00000576058 373 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.33□□□□□ -1.56
TM4SF1P30408 AC022884.3-201ENST00000579571 248 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 MTATP6P2-201ENST00000603319 678 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AL606490.9-201ENST00000603331 271 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 COX6CP4-201ENST00000605798 228 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AL121772.2-201ENST00000614331 297 ntBASIC5.33□□□□□ -1.56
TM4SF1P30408 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TM4SF1P30408 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TM4SF1P30408 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
TM4SF1P30408 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TM4SF1P30408 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM4SF1P30408 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.33□□□□□ -1.56
TM4SF1P30408 NOL8P1-201ENST00000508336 3529 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 RNA5SP307-201ENST00000362863 116 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TM4SF1P30408 RNU6-452P-201ENST00000384406 107 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 RNU6-185P-201ENST00000384421 107 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AL050321.1-201ENST00000432363 400 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AL035246.1-201ENST00000433554 1255 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 CASP3P1-201ENST00000446037 609 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AL354710.1-201ENST00000453641 246 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 DDX39BP2-208ENST00000453923 258 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 PGBD4P4-201ENST00000509673 613 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 IGKV2-23-201ENST00000518729 323 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC092451.2-201ENST00000538746 658 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.32□□□□□ -1.56
TM4SF1P30408 AC079880.2-201ENST00000603790 1213 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC079610.2-201ENST00000604818 690 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 IMMP1LP1-201ENST00000605170 488 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 SNORA51-201ENST00000606420 132 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC120053.1-201ENST00000607706 736 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC090912.3-201ENST00000609775 533 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 MIR7151-201ENST00000617477 60 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC091905.2-201ENST00000623143 306 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC007342.8-201ENST00000623278 678 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 CASC19-261ENST00000641853 1638 ntBASIC5.32□□□□□ -1.56
TM4SF1P30408 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.32□□□□□ -1.56
TM4SF1P30408 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TM4SF1P30408 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TM4SF1P30408 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.31□□□□□ -1.56
TM4SF1P30408 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TM4SF1P30408 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TM4SF1P30408 AL672167.1-204ENST00000641875 3017 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TM4SF1P30408 MIR16-2-201ENST00000362117 81 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 RNA5SP119-201ENST00000362715 117 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 RNU6-792P-201ENST00000363490 107 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 AC009237.5-201ENST00000414271 501 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 XKRYP4-201ENST00000414395 483 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 TRGV6-201ENST00000417928 299 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 FO393419.3-201ENST00000428741 282 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 YME1L1P1-201ENST00000429435 297 ntBASIC5.31□□□□□ -1.56
TM4SF1P30408 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms