Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
COL4A5P29400 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
COL4A5P29400 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL4A5P29400 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL4A5P29400 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A5P29400 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.55□□□□□ -1.68
COL4A5P29400 CDY3P-201ENST00000454543 1618 ntBASIC4.55□□□□□ -1.68
COL4A5P29400 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COL4A5P29400 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A5P29400 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 AC098799.1-201ENST00000504752 800 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 AC069240.1-201ENST00000548774 375 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.54□□□□□ -1.68
COL4A5P29400 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.54□□□□□ -1.68
COL4A5P29400 MIMT1-201ENST00000597105 1050 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A5P29400 AL773545.4-201ENST00000637262 310 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 AL513478.4-201ENST00000641636 310 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 AC083837.1-201ENST00000565297 2994 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL4A5P29400 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
COL4A5P29400 RNA5SP120-201ENST00000410900 112 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.54□□□□□ -1.68
COL4A5P29400 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 AP001486.1-201ENST00000463339 476 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 RPL23AP12-201ENST00000467573 473 ntBASIC4.54□□□□□ -1.68
COL4A5P29400 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.54□□□□□ -1.68
COL4A5P29400 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.54□□□□□ -1.68
COL4A5P29400 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.53□□□□□ -1.68
COL4A5P29400 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
COL4A5P29400 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL4A5P29400 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 AC005005.4-201ENST00000623789 16698 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 AL137918.1-201ENST00000624542 1922 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COL4A5P29400 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 SNORA71B-202ENST00000439232 272 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A5P29400 AC026784.1-201ENST00000507986 352 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 RPL23AP94-201ENST00000512518 302 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 SNORA70.17-201ENST00000516449 133 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 AC024224.1-201ENST00000538284 609 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.53□□□□□ -1.68
COL4A5P29400 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.53□□□□□ -1.68
COL4A5P29400 AC006077.1-201ENST00000604746 343 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 CR392039.4-201ENST00000624968 501 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 AC120036.2-201ENST00000509729 1474 ntBASIC4.53□□□□□ -1.68
COL4A5P29400 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL4A5P29400 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A5P29400 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A5P29400 MIR1251-201ENST00000408552 70 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.52□□□□□ -1.69
COL4A5P29400 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A5P29400 AL591363.1-201ENST00000450091 483 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 RBMY2UP-201ENST00000453474 324 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A5P29400 OR7E13P-201ENST00000526052 910 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 OR4A12P-201ENST00000530847 918 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 RPL21P7-201ENST00000557463 483 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.52□□□□□ -1.69
COL4A5P29400 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.52□□□□□ -1.69
COL4A5P29400 AL133383.2-201ENST00000622958 2336 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 AL365440.1-201ENST00000436135 2167 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 AC139426.3-201ENST00000605648 2059 ntBASIC4.52□□□□□ -1.69
COL4A5P29400 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
COL4A5P29400 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL4A5P29400 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
COL4A5P29400 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL4A5P29400 HSFY4P-201ENST00000415994 1181 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 OR6C71P-201ENST00000432580 913 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.51□□□□□ -1.69
COL4A5P29400 SNRPCP3-201ENST00000474888 476 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 AC084198.1-201ENST00000477747 402 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 RN7SL809P-201ENST00000482040 297 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.51□□□□□ -1.69
COL4A5P29400 AC008011.1-201ENST00000545989 227 ntBASIC4.51□□□□□ -1.69
COL4A5P29400 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms