Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC012400.1-201ENST00000518452 381 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHA3P29320 RPL23AP53-201ENST00000521854 457 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC004217.3-201ENST00000551552 878 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 NDUFB4P11-201ENST00000560510 395 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.95□□□□□ -1.62
EPHA3P29320 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC027243.2-201ENST00000602530 724 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AC009220.3-201ENST00000604318 586 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AC012557.2-201ENST00000605919 418 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AP005432.2-201ENST00000608162 586 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC011939.3-201ENST00000613686 466 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 AP003072.4-201ENST00000624580 310 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 ASNSP1-204ENST00000641977 1664 ntBASIC4.95□□□□□ -1.62
EPHA3P29320 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
EPHA3P29320 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
EPHA3P29320 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
EPHA3P29320 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 AL672167.1-205ENST00000641112 3080 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.94□□□□□ -1.62
EPHA3P29320 AC096656.1-201ENST00000623826 1364 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
EPHA3P29320 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
EPHA3P29320 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 RNA5SP435-201ENST00000364044 108 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 SNORA2.3-201ENST00000383920 135 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
EPHA3P29320 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.94□□□□□ -1.62
EPHA3P29320 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 RPS11P7-201ENST00000442125 465 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AC004980.3-201ENST00000447046 365 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 RPL7P59-201ENST00000447700 943 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC022431.1-201ENST00000450941 438 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 SEPT7P3-201ENST00000455017 621 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC084754.1-201ENST00000463466 464 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 MTND1P16-201ENST00000465177 898 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 SIAH1P1-201ENST00000479411 923 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC005912.1-201ENST00000495392 255 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 HSPE1P23-201ENST00000509838 286 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 HMGB3P13-201ENST00000511263 607 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.94□□□□□ -1.62
EPHA3P29320 TCP11X3P-202ENST00000514289 1254 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 RNU6-885P-201ENST00000516607 104 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AC008562.1-201ENST00000521763 330 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 AC005868.1-201ENST00000536421 331 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AL390726.5-202ENST00000564800 256 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.94□□□□□ -1.62
EPHA3P29320 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.94□□□□□ -1.62
EPHA3P29320 AC115085.1-201ENST00000588924 229 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC103881.1-201ENST00000603476 538 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 DUXAP11-201ENST00000603858 526 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC135507.1-201ENST00000607214 561 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AF246928.1-201ENST00000623768 87 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 AC007494.3-201ENST00000624660 743 ntBASIC4.94□□□□□ -1.62
EPHA3P29320 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.94□□□□□ -1.62
EPHA3P29320 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.94□□□□□ -1.62
EPHA3P29320 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.94□□□□□ -1.62
EPHA3P29320 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
EPHA3P29320 SALL4P2-201ENST00000423288 2910 ntBASIC4.93□□□□□ -1.62
EPHA3P29320 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHA3P29320 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
EPHA3P29320 AL445523.1-201ENST00000451184 1362 ntBASIC4.93□□□□□ -1.62
EPHA3P29320 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHA3P29320 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.93□□□□□ -1.62
EPHA3P29320 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHA3P29320 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHA3P29320 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms