Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A2P25067 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A2P25067 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.42□□□□□ -1.86
COL8A2P25067 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 RN7SKP202-201ENST00000410439 330 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 RNA5SP39-201ENST00000411245 120 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC098592.2-201ENST00000413158 265 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AL691447.1-201ENST00000419456 387 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL8A2P25067 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC069285.2-201ENST00000440210 275 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC239367.2-201ENST00000447309 705 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 RN7SL132P-201ENST00000478131 296 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 VN1R105P-201ENST00000486595 910 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC110792.1-201ENST00000491826 472 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC025554.1-201ENST00000505641 188 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 NPM1P41-201ENST00000512920 831 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 RN7SKP34-201ENST00000516142 244 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 RNU7-143P-201ENST00000516781 65 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.42□□□□□ -1.86
COL8A2P25067 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 HMGB3P26-201ENST00000560051 582 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC120057.2-201ENST00000571520 271 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 MIR5684-201ENST00000585074 65 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AL713998.2-201ENST00000604538 1198 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 AC099669.2-201ENST00000616549 437 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 MIR7702-201ENST00000621931 59 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 CDRT1-208ENST00000630868 794 ntBASIC3.42□□□□□ -1.86
COL8A2P25067 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A2P25067 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A2P25067 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL8A2P25067 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.42□□□□□ -1.86
COL8A2P25067 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.42□□□□□ -1.86
COL8A2P25067 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL8A2P25067 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL8A2P25067 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL8A2P25067 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.41□□□□□ -1.86
COL8A2P25067 SNORA60-201ENST00000362396 134 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-1263P-201ENST00000384601 106 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-1320P-201ENST00000390838 107 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-1269P-201ENST00000391139 107 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.41□□□□□ -1.86
COL8A2P25067 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.41□□□□□ -1.86
COL8A2P25067 AL606490.8-201ENST00000441624 319 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RPS11P1-201ENST00000451072 473 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-599P-201ENST00000459383 107 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-1193P-201ENST00000459461 107 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.41□□□□□ -1.86
COL8A2P25067 RPL23AP2-201ENST00000471227 466 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RPL29P14-201ENST00000495837 428 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL8A2P25067 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.41□□□□□ -1.86
COL8A2P25067 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
COL8A2P25067 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.41□□□□□ -1.86
COL8A2P25067 VWA8P1-201ENST00000510889 176 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 MTCYBP19-201ENST00000517463 1124 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 AC023632.4-201ENST00000517783 191 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 AC090281.1-201ENST00000523019 276 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.41□□□□□ -1.86
COL8A2P25067 RN7SL703P-201ENST00000578485 302 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 AC006130.2-201ENST00000586202 326 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.41□□□□□ -1.86
COL8A2P25067 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.41□□□□□ -1.86
COL8A2P25067 AC114878.2-201ENST00000604863 1251 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 AL451044.1-201ENST00000604867 238 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.41□□□□□ -1.86
COL8A2P25067 AL158062.1-201ENST00000619632 745 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-368P-201ENST00000620928 107 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 RNU6-538P-201ENST00000622329 107 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms