Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 AC111188.2-201ENST00000529697 1387 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN3P20807 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 U3.15-201ENST00000365398 212 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 RNU6-356P-201ENST00000384140 107 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 SNORA70E-201ENST00000384492 135 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 MIR124-3-201ENST00000384866 87 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 SFR1P1-201ENST00000403720 688 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AL078604.1-201ENST00000404609 466 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 BTBD10P2-201ENST00000404779 676 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 U3.36-201ENST00000408418 213 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 SNORA11-201ENST00000408789 128 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN3P20807 TMBIM7P-201ENST00000418074 855 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC093655.2-201ENST00000425735 631 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 YWHAZP8-201ENST00000436935 731 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN3P20807 Z99714.1-201ENST00000450463 807 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 BX276092.4-201ENST00000452056 248 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC244505.3-201ENST00000454598 187 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 RPL6P9-201ENST00000466502 859 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
CAPN3P20807 AC087879.1-201ENST00000474343 374 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC083982.1-201ENST00000485679 344 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN3P20807 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.84□□□□□ -1.63
CAPN3P20807 AC138938.1-201ENST00000515431 782 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 NDUFS5P6-201ENST00000529136 295 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
CAPN3P20807 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 AC113194.1-201ENST00000606037 500 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC018754.1-201ENST00000607486 925 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.84□□□□□ -1.63
CAPN3P20807 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC004232.3-201ENST00000622977 525 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC004808.1-201ENST00000627671 721 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 AC135068.12-201ENST00000637370 931 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CAPN3P20807 SALL4P2-201ENST00000423288 2910 ntBASIC4.84□□□□□ -1.63
CAPN3P20807 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.84□□□□□ -1.63
CAPN3P20807 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CAPN3P20807 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CAPN3P20807 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CAPN3P20807 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 AC000123.3-201ENST00000624029 4975 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 ZNF652P1-201ENST00000442420 1309 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AL122126.1-201ENST00000546905 1318 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CAPN3P20807 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 RNU6-619P-201ENST00000365146 108 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 MIR153-1-201ENST00000384914 90 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 MIR1250-201ENST00000408098 113 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 BTF3P8-201ENST00000414577 526 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 RPL26P29-201ENST00000415623 438 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 SFR1P2-201ENST00000421841 730 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 AC096632.1-201ENST00000427395 310 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 BX323845.1-201ENST00000432417 179 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.83□□□□□ -1.64
CAPN3P20807 NPM1P33-201ENST00000438918 872 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 PTGES3P1-201ENST00000439531 483 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.83□□□□□ -1.64
CAPN3P20807 AC004980.3-201ENST00000447046 365 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 RPS26P41-201ENST00000450370 284 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AL691482.1-201ENST00000453255 87 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 RPS17P2-201ENST00000461663 408 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC146507.1-201ENST00000468335 354 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 GAPDHP39-201ENST00000481866 979 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 RNA5SP249-201ENST00000516127 99 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 RN7SKP277-201ENST00000516895 283 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.83□□□□□ -1.64
CAPN3P20807 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 OR5AZ1P-201ENST00000527448 943 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 MTND2P26-201ENST00000528255 1029 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 OR4C2P-201ENST00000530855 1064 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms