Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC006994.1-201ENST00000438212 839 ntBASIC6.51□□□□□ -1.37
CFTRP13569 RN7SL807P-201ENST00000470923 297 ntBASIC6.51□□□□□ -1.37
CFTRP13569 RPL21P7-201ENST00000557463 483 ntBASIC6.51□□□□□ -1.37
CFTRP13569 AC016839.1-201ENST00000578162 867 ntBASIC6.51□□□□□ -1.37
CFTRP13569 MIMT1-201ENST00000597105 1050 ntBASIC6.51□□□□□ -1.37
CFTRP13569 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.51□□□□□ -1.37
CFTRP13569 AC006077.1-201ENST00000604746 343 ntBASIC6.51□□□□□ -1.37
CFTRP13569 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CFTRP13569 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CFTRP13569 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CFTRP13569 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CFTRP13569 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CFTRP13569 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CFTRP13569 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CFTRP13569 MIR195-201ENST00000385194 87 ntBASIC6.5□□□□□ -1.37
CFTRP13569 AC073063.1-201ENST00000434352 607 ntBASIC6.5□□□□□ -1.37
CFTRP13569 AC005019.1-201ENST00000436455 431 ntBASIC6.5□□□□□ -1.37
CFTRP13569 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.5□□□□□ -1.37
CFTRP13569 OR52Y1P-201ENST00000452418 828 ntBASIC6.5□□□□□ -1.37
CFTRP13569 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.5□□□□□ -1.37
CFTRP13569 AC090602.1-201ENST00000469695 252 ntBASIC6.5□□□□□ -1.37
CFTRP13569 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.5□□□□□ -1.37
CFTRP13569 AC103843.2-201ENST00000530523 682 ntBASIC6.5□□□□□ -1.37
CFTRP13569 AL139089.1-201ENST00000620372 975 ntBASIC6.5□□□□□ -1.37
CFTRP13569 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.5□□□□□ -1.37
CFTRP13569 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CFTRP13569 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CFTRP13569 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CFTRP13569 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CFTRP13569 MIR1271-201ENST00000408537 86 ntBASIC6.49□□□□□ -1.37
CFTRP13569 AC017083.1-201ENST00000428093 483 ntBASIC6.49□□□□□ -1.37
CFTRP13569 AC236972.1-201ENST00000433225 199 ntBASIC6.49□□□□□ -1.37
CFTRP13569 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.49□□□□□ -1.37
CFTRP13569 AC006511.1-201ENST00000470614 315 ntBASIC6.49□□□□□ -1.37
CFTRP13569 MTND6P6-201ENST00000478031 263 ntBASIC6.49□□□□□ -1.37
CFTRP13569 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.49□□□□□ -1.37
CFTRP13569 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.49□□□□□ -1.37
CFTRP13569 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.49□□□□□ -1.37
CFTRP13569 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.49□□□□□ -1.37
CFTRP13569 LSM3P2-201ENST00000551246 273 ntBASIC6.49□□□□□ -1.37
CFTRP13569 SNORD91B-202ENST00000608459 222 ntBASIC6.49□□□□□ -1.37
CFTRP13569 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
CFTRP13569 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.49□□□□□ -1.37
CFTRP13569 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.48□□□□□ -1.37
CFTRP13569 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.48□□□□□ -1.37
CFTRP13569 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CFTRP13569 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.48□□□□□ -1.37
CFTRP13569 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CFTRP13569 AC022106.2-201ENST00000620114 757 ntBASIC6.48□□□□□ -1.37
CFTRP13569 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.48□□□□□ -1.37
CFTRP13569 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.48□□□□□ -1.37
CFTRP13569 ATE1-AS1-202ENST00000636460 506 ntBASIC6.48□□□□□ -1.37
CFTRP13569 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.48□□□□□ -1.37
CFTRP13569 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CFTRP13569 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
CFTRP13569 CDY3P-201ENST00000454543 1618 ntBASIC6.48□□□□□ -1.37
CFTRP13569 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CFTRP13569 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CFTRP13569 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 AL512649.1-201ENST00000428997 581 ntBASIC6.47□□□□□ -1.37
CFTRP13569 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 RPL23AP12-201ENST00000467573 473 ntBASIC6.47□□□□□ -1.37
CFTRP13569 AC084198.1-201ENST00000477747 402 ntBASIC6.47□□□□□ -1.37
CFTRP13569 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.47□□□□□ -1.37
CFTRP13569 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 OR4A12P-201ENST00000530847 918 ntBASIC6.47□□□□□ -1.37
CFTRP13569 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CFTRP13569 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.47□□□□□ -1.37
CFTRP13569 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 HSPD1P11-201ENST00000508643 1702 ntBASIC6.47□□□□□ -1.37
CFTRP13569 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 AC118273.1-201ENST00000525324 3006 ntBASIC6.47□□□□□ -1.37
CFTRP13569 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CFTRP13569 RNA5SP50-201ENST00000363731 107 ntBASIC6.47□□□□□ -1.37
CFTRP13569 AL359643.1-201ENST00000404109 423 ntBASIC6.47□□□□□ -1.37
CFTRP13569 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 PSMC1P13-201ENST00000458195 985 ntBASIC6.47□□□□□ -1.37
CFTRP13569 RPL23AP94-201ENST00000512518 302 ntBASIC6.47□□□□□ -1.37
CFTRP13569 RNU2-27P-201ENST00000516185 142 ntBASIC6.47□□□□□ -1.37
CFTRP13569 OR7E13P-201ENST00000526052 910 ntBASIC6.47□□□□□ -1.37
CFTRP13569 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.47□□□□□ -1.37
CFTRP13569 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CFTRP13569 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.47□□□□□ -1.37
CFTRP13569 MIR4513-201ENST00000581077 86 ntBASIC6.47□□□□□ -1.37
CFTRP13569 AC068790.5-201ENST00000602741 355 ntBASIC6.47□□□□□ -1.37
CFTRP13569 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CFTRP13569 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CFTRP13569 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CFTRP13569 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CFTRP13569 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
CFTRP13569 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CFTRP13569 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms