Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MTND3P19-201ENST00000603825 345 ntBASIC4.74□□□□□ -1.65
PCNAP12004 AC104687.2-201ENST00000604442 342 ntBASIC4.74□□□□□ -1.65
PCNAP12004 MIR8069-1-201ENST00000616627 86 ntBASIC4.74□□□□□ -1.65
PCNAP12004 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCNAP12004 AC010975.3-201ENST00000618727 978 ntBASIC4.74□□□□□ -1.65
PCNAP12004 VN1R7P-201ENST00000619242 903 ntBASIC4.74□□□□□ -1.65
PCNAP12004 MIR8069-2-201ENST00000621412 86 ntBASIC4.74□□□□□ -1.65
PCNAP12004 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.74□□□□□ -1.65
PCNAP12004 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.74□□□□□ -1.65
PCNAP12004 OR6C71P-202ENST00000641886 1107 ntBASIC4.74□□□□□ -1.65
PCNAP12004 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCNAP12004 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.74□□□□□ -1.65
PCNAP12004 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCNAP12004 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCNAP12004 CR788268.1-201ENST00000603931 1809 ntBASIC4.74□□□□□ -1.65
PCNAP12004 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.74□□□□□ -1.65
PCNAP12004 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.74□□□□□ -1.65
PCNAP12004 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCNAP12004 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 SEPT7P7-201ENST00000420492 1301 ntBASIC4.73□□□□□ -1.65
PCNAP12004 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.73□□□□□ -1.65
PCNAP12004 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 MIR513B-201ENST00000385136 84 ntBASIC4.73□□□□□ -1.65
PCNAP12004 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 TBCAP2-201ENST00000416175 326 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.73□□□□□ -1.65
PCNAP12004 RPS3AP37-201ENST00000419176 745 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC027644.1-201ENST00000419595 298 ntBASIC4.73□□□□□ -1.65
PCNAP12004 RAC1P8-201ENST00000427086 527 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AL591719.1-201ENST00000444669 744 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 IFNWP4-201ENST00000453148 294 ntBASIC4.73□□□□□ -1.65
PCNAP12004 SNORD11.1-201ENST00000459482 85 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC018638.3-201ENST00000461273 132 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC112206.1-201ENST00000468416 477 ntBASIC4.73□□□□□ -1.65
PCNAP12004 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 AC020898.1-201ENST00000474167 787 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC074386.1-201ENST00000476560 767 ntBASIC4.73□□□□□ -1.65
PCNAP12004 METTL15P1-201ENST00000481421 1045 ntBASIC4.73□□□□□ -1.65
PCNAP12004 RPSAP50-201ENST00000481955 852 ntBASIC4.73□□□□□ -1.65
PCNAP12004 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 AC021146.5-201ENST00000503544 545 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.73□□□□□ -1.65
PCNAP12004 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 snoZ278.1-201ENST00000517059 112 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.73□□□□□ -1.65
PCNAP12004 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.73□□□□□ -1.65
PCNAP12004 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.73□□□□□ -1.65
PCNAP12004 MTCO3P15-201ENST00000526563 574 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.73□□□□□ -1.65
PCNAP12004 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.73□□□□□ -1.65
PCNAP12004 MTND3P12-201ENST00000559068 328 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC090888.2-201ENST00000559765 1144 ntBASIC4.73□□□□□ -1.65
PCNAP12004 CYCSP40-201ENST00000575927 294 ntBASIC4.73□□□□□ -1.65
PCNAP12004 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 MEMO1P5-201ENST00000604810 406 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AL583856.2-201ENST00000606298 543 ntBASIC4.73□□□□□ -1.65
PCNAP12004 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 AC012414.7-202ENST00000622705 1090 ntBASIC4.73□□□□□ -1.65
PCNAP12004 AC097655.1-201ENST00000635075 318 ntBASIC4.73□□□□□ -1.65
PCNAP12004 MTND4P10-201ENST00000446199 1363 ntBASIC4.73□□□□□ -1.65
PCNAP12004 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.73□□□□□ -1.65
PCNAP12004 AC006042.3-201ENST00000454684 1469 ntBASIC4.73□□□□□ -1.65
PCNAP12004 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCNAP12004 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PCNAP12004 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 AC087190.4-201ENST00000574616 8334 ntBASIC4.72□□□□□ -1.65
PCNAP12004 RNU4-68P-201ENST00000364314 141 ntBASIC4.72□□□□□ -1.65
PCNAP12004 RNU4-4P-201ENST00000364588 130 ntBASIC4.72□□□□□ -1.65
PCNAP12004 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 MTCO1P56-201ENST00000401674 224 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AL357515.1-201ENST00000402967 542 ntBASIC4.72□□□□□ -1.65
PCNAP12004 SNORA11C-201ENST00000408532 129 ntBASIC4.72□□□□□ -1.65
PCNAP12004 HIGD1AP15-201ENST00000416198 280 ntBASIC4.72□□□□□ -1.65
PCNAP12004 XKRYP1-201ENST00000423438 492 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.72□□□□□ -1.65
PCNAP12004 XKRYP2-201ENST00000432915 492 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.72□□□□□ -1.65
PCNAP12004 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 NANOGP2-201ENST00000435391 727 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.72□□□□□ -1.65
PCNAP12004 AL031663.1-201ENST00000437445 219 ntBASIC4.72□□□□□ -1.65
PCNAP12004 MTCYBP42-201ENST00000444653 1130 ntBASIC4.72□□□□□ -1.65
PCNAP12004 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms