Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR4738-201ENST00000579134 87 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL1P09341 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.1□□□□□ -1.91
CXCL1P09341 AC009318.3-201ENST00000616916 503 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 uc_338.13-201ENST00000618243 179 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC068870.2-201ENST00000620635 389 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC140479.6-201ENST00000633535 357 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 AC008013.2-202ENST00000637965 364 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CXCL1P09341 OR56B2P-202ENST00000641377 2453 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CXCL1P09341 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.1□□□□□ -1.91
CXCL1P09341 AC007529.1-201ENST00000418574 2178 ntBASIC3.1□□□□□ -1.91
CXCL1P09341 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL1P09341 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CXCL1P09341 U1.1-201ENST00000384101 164 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CXCL1P09341 AL049697.2-201ENST00000403708 294 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC096644.3-201ENST00000416788 338 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 RPS15AP6-201ENST00000420703 385 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 UQCRBP1-201ENST00000421129 336 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 RPL31P12-201ENST00000422587 358 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC093084.1-201ENST00000424233 687 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AL138785.1-201ENST00000425821 331 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL1P09341 RPL31P44-201ENST00000447680 377 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.09□□□□□ -1.91
CXCL1P09341 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL1P09341 RN7SL826P-201ENST00000479724 288 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 METTL15P1-201ENST00000481421 1045 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 RPL7P24-201ENST00000493052 752 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.09□□□□□ -1.91
CXCL1P09341 PCBP2P3-201ENST00000509726 843 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.09□□□□□ -1.91
CXCL1P09341 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC090888.3-201ENST00000558917 509 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL1P09341 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC069061.3-201ENST00000582254 823 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 VN1R84P-201ENST00000593697 235 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 AC008782.1-201ENST00000603386 430 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC010680.3-201ENST00000604215 520 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC115286.1-201ENST00000604298 434 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AL390816.3-201ENST00000604527 1066 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AL591424.2-201ENST00000617023 128 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AL136964.1-201ENST00000622038 2990 ntBASIC3.09□□□□□ -1.91
CXCL1P09341 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.09□□□□□ -1.91
CXCL1P09341 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CXCL1P09341 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.09□□□□□ -1.91
CXCL1P09341 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CXCL1P09341 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CXCL1P09341 CASC19-284ENST00000642142 1868 ntBASIC3.09□□□□□ -1.92
CXCL1P09341 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CXCL1P09341 Z82217.1-201ENST00000625157 8149 ntBASIC3.09□□□□□ -1.92
CXCL1P09341 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CXCL1P09341 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CXCL1P09341 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.08□□□□□ -1.92
CXCL1P09341 SNORA70F-201ENST00000384142 135 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 RNA5SP87-201ENST00000384155 118 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 MTCO3P31-201ENST00000405526 789 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 RNU4-34P-201ENST00000410431 124 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AL139095.3-201ENST00000419672 1203 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL1P09341 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.08□□□□□ -1.92
CXCL1P09341 AC079355.1-201ENST00000421770 223 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL1P09341 RPL12P28-201ENST00000430852 489 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.08□□□□□ -1.92
CXCL1P09341 RPL23AP46-201ENST00000438548 490 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL1P09341 RPS20P4-201ENST00000461659 355 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AP002371.1-201ENST00000463604 433 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AL049830.2-201ENST00000480072 201 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL1P09341 HAUS1P1-201ENST00000505275 832 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 NDUFB4P9-201ENST00000511646 388 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.08□□□□□ -1.92
CXCL1P09341 IGKV2-23-201ENST00000518729 323 ntBASIC3.08□□□□□ -1.92
CXCL1P09341 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.08□□□□□ -1.92
CXCL1P09341 SMARCE1P4-201ENST00000523647 241 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms