Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR23A-201ENST00000385245 73 ntBASIC4.94□□□□□ -1.62
RB1P06400 MTND4P11-201ENST00000417020 1058 ntBASIC4.94□□□□□ -1.62
RB1P06400 VN1R37P-201ENST00000419096 748 ntBASIC4.94□□□□□ -1.62
RB1P06400 RPL7P57-201ENST00000423238 740 ntBASIC4.94□□□□□ -1.62
RB1P06400 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.94□□□□□ -1.62
RB1P06400 FO393414.1-201ENST00000428697 1184 ntBASIC4.94□□□□□ -1.62
RB1P06400 AL353597.2-202ENST00000434901 373 ntBASIC4.94□□□□□ -1.62
RB1P06400 AL031663.1-201ENST00000437445 219 ntBASIC4.94□□□□□ -1.62
RB1P06400 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.94□□□□□ -1.62
RB1P06400 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.94□□□□□ -1.62
RB1P06400 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.94□□□□□ -1.62
RB1P06400 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 AP003730.1-201ENST00000524605 285 ntBASIC4.94□□□□□ -1.62
RB1P06400 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 AC126365.2-201ENST00000580630 379 ntBASIC4.94□□□□□ -1.62
RB1P06400 MIR4472-2-201ENST00000582069 67 ntBASIC4.94□□□□□ -1.62
RB1P06400 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 AC123786.2-201ENST00000603459 275 ntBASIC4.94□□□□□ -1.62
RB1P06400 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.94□□□□□ -1.62
RB1P06400 U6.48-201ENST00000618523 106 ntBASIC4.94□□□□□ -1.62
RB1P06400 AC073569.3-201ENST00000619055 682 ntBASIC4.94□□□□□ -1.62
RB1P06400 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.94□□□□□ -1.62
RB1P06400 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RB1P06400 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 AC000123.3-201ENST00000624029 4975 ntBASIC4.93□□□□□ -1.62
RB1P06400 AL121657.1-201ENST00000327215 531 ntBASIC4.93□□□□□ -1.62
RB1P06400 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RB1P06400 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 MIR92A2-201ENST00000385299 75 ntBASIC4.93□□□□□ -1.62
RB1P06400 AL355615.1-201ENST00000406187 641 ntBASIC4.93□□□□□ -1.62
RB1P06400 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 RPL6P29-201ENST00000414863 865 ntBASIC4.93□□□□□ -1.62
RB1P06400 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.93□□□□□ -1.62
RB1P06400 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.93□□□□□ -1.62
RB1P06400 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.93□□□□□ -1.62
RB1P06400 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.93□□□□□ -1.62
RB1P06400 AC092447.2-201ENST00000435487 669 ntBASIC4.93□□□□□ -1.62
RB1P06400 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.93□□□□□ -1.62
RB1P06400 EEF1A1P1-201ENST00000447052 739 ntBASIC4.93□□□□□ -1.62
RB1P06400 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 AL096803.2-201ENST00000450032 677 ntBASIC4.93□□□□□ -1.62
RB1P06400 EIF4A1P11-201ENST00000451239 222 ntBASIC4.93□□□□□ -1.62
RB1P06400 AL035407.2-201ENST00000454090 378 ntBASIC4.93□□□□□ -1.62
RB1P06400 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.93□□□□□ -1.62
RB1P06400 RN7SL98P-201ENST00000462271 300 ntBASIC4.93□□□□□ -1.62
RB1P06400 RPL21P18-201ENST00000469899 480 ntBASIC4.93□□□□□ -1.62
RB1P06400 UQCRHP4-201ENST00000471686 272 ntBASIC4.93□□□□□ -1.62
RB1P06400 RPS17P11-201ENST00000474297 293 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC105137.1-201ENST00000484355 562 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.93□□□□□ -1.62
RB1P06400 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.93□□□□□ -1.62
RB1P06400 AC233702.9-201ENST00000581528 203 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.93□□□□□ -1.62
RB1P06400 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.93□□□□□ -1.62
RB1P06400 AC068620.3-201ENST00000602749 560 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC009643.2-201ENST00000603543 1448 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC010200.2-201ENST00000605098 235 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC144521.1-201ENST00000607148 956 ntBASIC4.93□□□□□ -1.62
RB1P06400 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 AP003476.1-201ENST00000623984 516 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC011447.7-201ENST00000624228 1590 ntBASIC4.93□□□□□ -1.62
RB1P06400 AC008785.1-201ENST00000624475 456 ntBASIC4.93□□□□□ -1.62
RB1P06400 MIR3653-201ENST00000625572 110 ntBASIC4.93□□□□□ -1.62
RB1P06400 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.93□□□□□ -1.62
RB1P06400 U6.107-201ENST00000637108 79 ntBASIC4.93□□□□□ -1.62
RB1P06400 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.93□□□□□ -1.62
RB1P06400 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RB1P06400 MTND4P9-201ENST00000507819 1346 ntBASIC4.93□□□□□ -1.62
RB1P06400 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RB1P06400 AC090971.4-201ENST00000560291 1800 ntBASIC4.93□□□□□ -1.62
RB1P06400 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.92□□□□□ -1.62
RB1P06400 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RB1P06400 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RB1P06400 ADAM5-202ENST00000399789 1942 ntBASIC4.92□□□□□ -1.62
RB1P06400 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms