Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MTCYBP15-201ENST00000433123 1127 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AL117351.1-201ENST00000438864 766 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.75□□□□□ -1.65
COL2A1P02458 RAB9AP1-201ENST00000449393 573 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AL353718.1-201ENST00000451028 517 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 FABP3P2-201ENST00000453169 399 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 MTND6P32-201ENST00000457611 483 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 RPS4XP15-201ENST00000489210 795 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC093534.1-201ENST00000504977 132 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.75□□□□□ -1.65
COL2A1P02458 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 AC022968.1-201ENST00000567372 442 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.75□□□□□ -1.65
COL2A1P02458 AC025627.2-201ENST00000576220 160 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC012467.1-201ENST00000607740 256 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 OR2BH1P-201ENST00000608850 864 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC004908.3-201ENST00000610248 625 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 AC023509.5-201ENST00000617434 807 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.75□□□□□ -1.65
COL2A1P02458 HPVC1-201ENST00000629899 1198 ntBASIC4.75□□□□□ -1.65
COL2A1P02458 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL2A1P02458 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL2A1P02458 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL2A1P02458 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 AP000542.2-201ENST00000623199 6179 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 AC006042.3-201ENST00000454684 1469 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 OR5T3-201ENST00000303059 1023 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 OR4A15-201ENST00000314706 1035 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL2A1P02458 RNU6-1176P-201ENST00000390955 107 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL2A1P02458 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL2A1P02458 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.74□□□□□ -1.65
COL2A1P02458 MTND2P25-201ENST00000449028 610 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.74□□□□□ -1.65
COL2A1P02458 OR9M1P-201ENST00000459641 921 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 AL139099.1-201ENST00000497398 403 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 SNORA70.24-201ENST00000517233 118 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 DUXAP2-201ENST00000519198 589 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.74□□□□□ -1.65
COL2A1P02458 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL2A1P02458 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.74□□□□□ -1.65
COL2A1P02458 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.74□□□□□ -1.65
COL2A1P02458 AL731537.2-201ENST00000561565 951 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.74□□□□□ -1.65
COL2A1P02458 SNX6P1-201ENST00000601728 1224 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.74□□□□□ -1.65
COL2A1P02458 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 AF001550.2-201ENST00000636643 217 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 MAPK10-320ENST00000641462 6696 ntBASIC4.74□□□□□ -1.65
COL2A1P02458 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
COL2A1P02458 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL2A1P02458 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL2A1P02458 RNU2-72P-201ENST00000411175 163 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 Z92545.1-201ENST00000411782 234 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC068533.1-201ENST00000418542 415 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.73□□□□□ -1.65
COL2A1P02458 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.73□□□□□ -1.65
COL2A1P02458 AC090589.1-201ENST00000473109 362 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.73□□□□□ -1.65
COL2A1P02458 RN7SKP141-201ENST00000516167 338 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.73□□□□□ -1.65
COL2A1P02458 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.73□□□□□ -1.65
COL2A1P02458 CYCSP30-201ENST00000546447 172 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.73□□□□□ -1.65
COL2A1P02458 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL2A1P02458 AC007599.1-201ENST00000568688 1174 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.73□□□□□ -1.65
COL2A1P02458 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.73□□□□□ -1.65
COL2A1P02458 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.73□□□□□ -1.65
COL2A1P02458 AL139022.2-201ENST00000606934 443 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC009269.6-201ENST00000621778 588 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 FP236240.3-201ENST00000623061 327 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AC104820.1-201ENST00000624183 307 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.73□□□□□ -1.65
COL2A1P02458 AC058791.1-201ENST00000608412 3198 ntBASIC4.73□□□□□ -1.65
COL2A1P02458 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL2A1P02458 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
COL2A1P02458 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL2A1P02458 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.72□□□□□ -1.65
COL2A1P02458 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL2A1P02458 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.72□□□□□ -1.65
COL2A1P02458 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.72□□□□□ -1.65
COL2A1P02458 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 RN7SKP74-201ENST00000362849 309 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.72□□□□□ -1.65
COL2A1P02458 U8.11-201ENST00000384699 133 ntBASIC4.72□□□□□ -1.65
COL2A1P02458 U8.12-201ENST00000384701 133 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms