Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 Y_RNA.719-201ENST00000517156 106 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.61□□□□□ -1.67
LDLRP01130 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.61□□□□□ -1.67
LDLRP01130 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.61□□□□□ -1.67
LDLRP01130 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.61□□□□□ -1.67
LDLRP01130 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.61□□□□□ -1.67
LDLRP01130 AC022884.3-201ENST00000579571 248 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AC068790.7-201ENST00000602347 528 ntBASIC4.61□□□□□ -1.67
LDLRP01130 MEMO1P5-201ENST00000604810 406 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AC011374.2-201ENST00000607135 526 ntBASIC4.61□□□□□ -1.67
LDLRP01130 OR7A19P-201ENST00000608051 733 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.61□□□□□ -1.67
LDLRP01130 RNU6-1192P-201ENST00000612197 107 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.61□□□□□ -1.67
LDLRP01130 AL049794.2-201ENST00000616301 365 ntBASIC4.61□□□□□ -1.67
LDLRP01130 RNU6-489P-201ENST00000618289 107 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AC140113.4-201ENST00000622087 222 ntBASIC4.61□□□□□ -1.67
LDLRP01130 AC015804.1-201ENST00000622935 435 ntBASIC4.61□□□□□ -1.67
LDLRP01130 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.61□□□□□ -1.67
LDLRP01130 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.61□□□□□ -1.67
LDLRP01130 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.61□□□□□ -1.67
LDLRP01130 MTCO1P18-201ENST00000455518 1419 ntBASIC4.61□□□□□ -1.67
LDLRP01130 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LDLRP01130 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LDLRP01130 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 CASC19-284ENST00000642142 1868 ntBASIC4.6□□□□□ -1.67
LDLRP01130 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 RNU5B-4P-201ENST00000363508 111 ntBASIC4.6□□□□□ -1.67
LDLRP01130 MIR195-201ENST00000385194 87 ntBASIC4.6□□□□□ -1.67
LDLRP01130 RNA5SP332-201ENST00000391063 115 ntBASIC4.6□□□□□ -1.67
LDLRP01130 RPS3AP23-201ENST00000401762 784 ntBASIC4.6□□□□□ -1.67
LDLRP01130 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 RNU6-584P-201ENST00000410350 95 ntBASIC4.6□□□□□ -1.67
LDLRP01130 CEACAMP8-201ENST00000413902 580 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC069213.2-201ENST00000420238 366 ntBASIC4.6□□□□□ -1.67
LDLRP01130 TCEA1P2-201ENST00000420496 906 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.6□□□□□ -1.67
LDLRP01130 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 HMGB3P5-201ENST00000428894 612 ntBASIC4.6□□□□□ -1.67
LDLRP01130 ETF1P3-201ENST00000430422 1160 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AL353597.2-202ENST00000434901 373 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.6□□□□□ -1.67
LDLRP01130 RPL34P20-201ENST00000442771 351 ntBASIC4.6□□□□□ -1.67
LDLRP01130 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.6□□□□□ -1.67
LDLRP01130 TDGF1P1-201ENST00000445734 527 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC092685.1-201ENST00000447960 1243 ntBASIC4.6□□□□□ -1.67
LDLRP01130 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 OR52J1P-201ENST00000450596 932 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.6□□□□□ -1.67
LDLRP01130 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.6□□□□□ -1.67
LDLRP01130 RPS27AP16-201ENST00000492222 470 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC104971.1-201ENST00000495117 578 ntBASIC4.6□□□□□ -1.67
LDLRP01130 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 SLC25A15P5-201ENST00000508033 253 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC108471.1-201ENST00000513977 287 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.6□□□□□ -1.67
LDLRP01130 OR5AK3P-201ENST00000527486 1297 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC009643.1-201ENST00000532030 391 ntBASIC4.6□□□□□ -1.67
LDLRP01130 OR7E128P-201ENST00000532736 1024 ntBASIC4.6□□□□□ -1.67
LDLRP01130 GCSHP4-201ENST00000538792 439 ntBASIC4.6□□□□□ -1.67
LDLRP01130 NPM1P47-201ENST00000560843 856 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC010735.1-201ENST00000567305 1026 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 AC090312.1-201ENST00000580637 348 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC040904.1-201ENST00000590850 223 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AL391358.1-201ENST00000605342 190 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC099785.1-201ENST00000605697 437 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC084824.4-201ENST00000620106 731 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC005086.4-201ENST00000623065 213 ntBASIC4.6□□□□□ -1.67
LDLRP01130 AC007342.8-201ENST00000623278 678 ntBASIC4.6□□□□□ -1.67
LDLRP01130 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LDLRP01130 AC017007.4-201ENST00000503353 1352 ntBASIC4.6□□□□□ -1.67
LDLRP01130 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.6□□□□□ -1.67
LDLRP01130 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.6□□□□□ -1.67
LDLRP01130 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LDLRP01130 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms