Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR548AB-201ENST00000584917 84 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC006504.3-201ENST00000586818 523 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC024560.3-201ENST00000608482 349 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC092954.2-201ENST00000609103 430 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC037198.3-201ENST00000616754 526 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CNOT4O95628 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 AL354685.2-201ENST00000448218 1447 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 AC004656.1-201ENST00000568479 4951 ntBASIC5.37□□□□□ -1.55
CNOT4O95628 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CNOT4O95628 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNOT4O95628 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 AC103591.2-201ENST00000265259 766 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 RNU5F-7P-201ENST00000363696 115 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 RNA5SP284-201ENST00000384547 118 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC087752.1-201ENST00000391360 558 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 RN7SKP151-201ENST00000410230 316 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 RNU6-77P-201ENST00000410554 91 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 MTND6P12-201ENST00000428247 522 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 RAB11AP1-201ENST00000442978 646 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 DNAJC19P8-201ENST00000452887 259 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC092001.1-201ENST00000453012 261 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 AL672167.3-201ENST00000465951 960 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 RPL23AP40-201ENST00000487630 390 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC023424.2-201ENST00000493479 777 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 SETP14-201ENST00000497538 873 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC022483.1-201ENST00000514020 567 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC027308.1-201ENST00000517993 110 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 IGJP1-201ENST00000522682 475 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.36□□□□□ -1.55
CNOT4O95628 AC119403.2-201ENST00000590960 598 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC020916.2-201ENST00000591242 360 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC025449.1-201ENST00000603896 529 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC009027.1-201ENST00000604510 479 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC090948.2-201ENST00000607363 564 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC104458.1-201ENST00000608243 463 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CNOT4O95628 RBPJP7-201ENST00000442803 1447 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 RBPJP5-201ENST00000449433 1447 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 USP9YP4-201ENST00000424401 1745 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 AC008627.1-201ENST00000517511 1704 ntBASIC5.36□□□□□ -1.55
CNOT4O95628 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CNOT4O95628 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CNOT4O95628 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CNOT4O95628 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.36□□□□□ -1.55
CNOT4O95628 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CNOT4O95628 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CNOT4O95628 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CNOT4O95628 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms