Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SSSCA1O60232 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SSSCA1O60232 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 RNU1-87P-201ENST00000363727 170 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC011933.1-201ENST00000413334 321 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AC114814.2-201ENST00000419195 485 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 RPS29P17-201ENST00000430795 166 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 BTF3P10-201ENST00000433415 495 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AL627308.1-201ENST00000435693 821 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 RPS11P1-201ENST00000451072 473 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AC116533.1-201ENST00000459748 321 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AC004801.2-202ENST00000463559 283 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AL132838.2-201ENST00000492041 314 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC105233.1-201ENST00000498840 781 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC111000.3-201ENST00000508057 576 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC044860.2-201ENST00000561005 179 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AGGF1P8-201ENST00000562979 1000 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 HNRNPCP4-201ENST00000571636 900 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.12□□□□□ -1.91
SSSCA1O60232 AC110743.1-201ENST00000584870 478 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 SDR42E1P1-201ENST00000611327 477 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 MIR6780A-201ENST00000615089 68 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 MIR6886-201ENST00000619864 61 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 AC091953.3-201ENST00000623220 236 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 TNPO1P3-201ENST00000436471 2662 ntBASIC3.12□□□□□ -1.91
SSSCA1O60232 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
SSSCA1O60232 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSSCA1O60232 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 AC009229.4-201ENST00000623854 1947 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AL021368.2-201ENST00000606125 5352 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SSSCA1O60232 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.11□□□□□ -1.91
SSSCA1O60232 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SSSCA1O60232 RNU11-4P-201ENST00000391149 133 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AL161909.1-201ENST00000397390 712 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 RN7SKP177-201ENST00000410567 355 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AL590806.1-201ENST00000415818 853 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC127526.1-201ENST00000417526 366 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 RPL12P28-201ENST00000430852 489 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 RPL12P46-201ENST00000436610 195 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.11□□□□□ -1.91
SSSCA1O60232 PTMAP6-201ENST00000439110 327 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.11□□□□□ -1.91
SSSCA1O60232 RPL5P32-201ENST00000454085 879 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC084198.1-201ENST00000477747 402 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC068305.1-201ENST00000497406 726 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.11□□□□□ -1.91
SSSCA1O60232 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.11□□□□□ -1.91
SSSCA1O60232 CYCSP29-201ENST00000533731 318 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.11□□□□□ -1.91
SSSCA1O60232 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AC091516.1-201ENST00000549191 703 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.11□□□□□ -1.91
SSSCA1O60232 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AL109741.3-201ENST00000561748 592 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 CYP2C60P-201ENST00000566088 139 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.11□□□□□ -1.91
SSSCA1O60232 MIR4330-201ENST00000579077 105 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC020915.5-201ENST00000596836 964 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.11□□□□□ -1.91
SSSCA1O60232 AL137849.1-201ENST00000604767 169 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AL592295.2-201ENST00000612578 206 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 MIR7155-201ENST00000615925 56 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 AC018445.2-201ENST00000622987 260 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.11□□□□□ -1.91
SSSCA1O60232 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SSSCA1O60232 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SSSCA1O60232 CASC19-284ENST00000642142 1868 ntBASIC3.11□□□□□ -1.91
SSSCA1O60232 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms