Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 RPL26P29-201ENST00000415623 438 ntBASIC4.39□□□□□ -1.71
SSX4O60224 COX6B1P1-201ENST00000415962 213 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AL449283.1-202ENST00000418249 604 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 GAPDHP49-201ENST00000421421 961 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.39□□□□□ -1.71
SSX4O60224 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 AL358794.1-201ENST00000445689 381 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 MTND1P33-201ENST00000446251 917 ntBASIC4.39□□□□□ -1.71
SSX4O60224 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.39□□□□□ -1.71
SSX4O60224 BX248409.1-201ENST00000455497 255 ntBASIC4.39□□□□□ -1.71
SSX4O60224 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 AC092324.1-201ENST00000468671 324 ntBASIC4.39□□□□□ -1.71
SSX4O60224 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 RPL7P16-201ENST00000479738 738 ntBASIC4.39□□□□□ -1.71
SSX4O60224 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSX4O60224 UBA52P3-201ENST00000491303 382 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 RNU6-416P-201ENST00000516265 103 ntBASIC4.39□□□□□ -1.71
SSX4O60224 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 NPM1P6-201ENST00000521088 871 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 AC022882.1-201ENST00000532142 501 ntBASIC4.39□□□□□ -1.71
SSX4O60224 GSTP1P1-201ENST00000548078 319 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.39□□□□□ -1.71
SSX4O60224 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.39□□□□□ -1.71
SSX4O60224 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 AC110743.1-201ENST00000584870 478 ntBASIC4.39□□□□□ -1.71
SSX4O60224 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 PCNAP1-202ENST00000595299 752 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AC112220.2-201ENST00000605513 533 ntBASIC4.39□□□□□ -1.71
SSX4O60224 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 AC018926.3-201ENST00000618841 406 ntBASIC4.39□□□□□ -1.71
SSX4O60224 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.39□□□□□ -1.71
SSX4O60224 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSX4O60224 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.39□□□□□ -1.71
SSX4O60224 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX4O60224 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.39□□□□□ -1.71
SSX4O60224 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSX4O60224 IRF5P1-201ENST00000504852 2164 ntBASIC4.38□□□□□ -1.71
SSX4O60224 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SSX4O60224 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 AP000568.1-201ENST00000282964 442 ntBASIC4.38□□□□□ -1.71
SSX4O60224 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX4O60224 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX4O60224 RNA5SP90-201ENST00000364801 99 ntBASIC4.38□□□□□ -1.71
SSX4O60224 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSX4O60224 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSX4O60224 CYB5AP4-201ENST00000396692 399 ntBASIC4.38□□□□□ -1.71
SSX4O60224 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 MIR1182-201ENST00000408363 97 ntBASIC4.38□□□□□ -1.71
SSX4O60224 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 DDX39BP1-205ENST00000422507 192 ntBASIC4.38□□□□□ -1.71
SSX4O60224 EI24P4-201ENST00000423683 1078 ntBASIC4.38□□□□□ -1.71
SSX4O60224 EIF4HP2-201ENST00000424380 563 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AC009238.2-201ENST00000431026 355 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 AC234064.1-201ENST00000436312 247 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 ACTR3P2-201ENST00000439585 1257 ntBASIC4.38□□□□□ -1.71
SSX4O60224 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.38□□□□□ -1.71
SSX4O60224 TDGF1P1-201ENST00000445734 527 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AL009048.1-201ENST00000450437 298 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AC079168.1-201ENST00000458741 345 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.38□□□□□ -1.71
SSX4O60224 RN7SL860P-201ENST00000473738 223 ntBASIC4.38□□□□□ -1.71
SSX4O60224 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 RN7SL244P-201ENST00000493405 297 ntBASIC4.38□□□□□ -1.71
SSX4O60224 AC008494.2-201ENST00000514544 370 ntBASIC4.38□□□□□ -1.71
SSX4O60224 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.38□□□□□ -1.71
SSX4O60224 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.38□□□□□ -1.71
SSX4O60224 OR7E13P-201ENST00000526052 910 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms