Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TO15178 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.45□□□□□ -1.7
TO15178 AC009951.1-201ENST00000623674 2614 ntBASIC4.45□□□□□ -1.7
TO15178 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.45□□□□□ -1.7
TO15178 TLK1P1-201ENST00000456760 2440 ntBASIC4.45□□□□□ -1.7
TO15178 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.45□□□□□ -1.7
TO15178 SAMMSON-226ENST00000642089 1582 ntBASIC4.45□□□□□ -1.7
TO15178 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 MTCO1P6-201ENST00000481192 1384 ntBASIC4.45□□□□□ -1.7
TO15178 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.45□□□□□ -1.7
TO15178 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 AL133270.1-201ENST00000402635 279 ntBASIC4.45□□□□□ -1.7
TO15178 ZNF602P-201ENST00000405929 924 ntBASIC4.45□□□□□ -1.7
TO15178 U3.35-201ENST00000408405 208 ntBASIC4.45□□□□□ -1.7
TO15178 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.45□□□□□ -1.7
TO15178 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.45□□□□□ -1.7
TO15178 USP9YP21-201ENST00000420603 432 ntBASIC4.45□□□□□ -1.7
TO15178 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.45□□□□□ -1.7
TO15178 OR2AH1P-201ENST00000425717 928 ntBASIC4.45□□□□□ -1.7
TO15178 AP001324.1-201ENST00000428553 399 ntBASIC4.45□□□□□ -1.7
TO15178 AC114973.1-201ENST00000429057 632 ntBASIC4.45□□□□□ -1.7
TO15178 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.45□□□□□ -1.7
TO15178 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.45□□□□□ -1.7
TO15178 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.45□□□□□ -1.7
TO15178 RPS7P5-201ENST00000441482 581 ntBASIC4.45□□□□□ -1.7
TO15178 RPS3AP53-201ENST00000454716 778 ntBASIC4.45□□□□□ -1.7
TO15178 CDC42P1-201ENST00000456658 548 ntBASIC4.45□□□□□ -1.7
TO15178 DUXAP8-207ENST00000456786 622 ntBASIC4.45□□□□□ -1.7
TO15178 RPS3AP41-201ENST00000462701 778 ntBASIC4.45□□□□□ -1.7
TO15178 RN7SL610P-201ENST00000463845 291 ntBASIC4.45□□□□□ -1.7
TO15178 RPL23AP71-201ENST00000470966 469 ntBASIC4.45□□□□□ -1.7
TO15178 AC096571.1-202ENST00000506634 735 ntBASIC4.45□□□□□ -1.7
TO15178 AC119751.1-201ENST00000513357 765 ntBASIC4.45□□□□□ -1.7
TO15178 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.45□□□□□ -1.7
TO15178 TCP11X3P-202ENST00000514289 1254 ntBASIC4.45□□□□□ -1.7
TO15178 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.45□□□□□ -1.7
TO15178 RNA5SP249-201ENST00000516127 99 ntBASIC4.45□□□□□ -1.7
TO15178 SNORA19.3-201ENST00000516165 130 ntBASIC4.45□□□□□ -1.7
TO15178 RNU6-1028P-201ENST00000517164 93 ntBASIC4.45□□□□□ -1.7
TO15178 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.45□□□□□ -1.7
TO15178 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.45□□□□□ -1.7
TO15178 AC134698.5-201ENST00000519444 336 ntBASIC4.45□□□□□ -1.7
TO15178 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.45□□□□□ -1.7
TO15178 COX6B1P6-201ENST00000522347 255 ntBASIC4.45□□□□□ -1.7
TO15178 AC022790.1-201ENST00000522872 204 ntBASIC4.45□□□□□ -1.7
TO15178 AC104417.1-201ENST00000523974 751 ntBASIC4.45□□□□□ -1.7
TO15178 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.45□□□□□ -1.7
TO15178 OR7E13P-201ENST00000526052 910 ntBASIC4.45□□□□□ -1.7
TO15178 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.45□□□□□ -1.7
TO15178 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.45□□□□□ -1.7
TO15178 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.45□□□□□ -1.7
TO15178 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.45□□□□□ -1.7
TO15178 CYCSP40-201ENST00000575927 294 ntBASIC4.45□□□□□ -1.7
TO15178 MIR5699-201ENST00000578903 90 ntBASIC4.45□□□□□ -1.7
TO15178 MIR3934-201ENST00000579806 107 ntBASIC4.45□□□□□ -1.7
TO15178 AC090312.2-201ENST00000582687 378 ntBASIC4.45□□□□□ -1.7
TO15178 MIR4737-201ENST00000583979 81 ntBASIC4.45□□□□□ -1.7
TO15178 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.45□□□□□ -1.7
TO15178 AC010680.3-201ENST00000604215 520 ntBASIC4.45□□□□□ -1.7
TO15178 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.45□□□□□ -1.7
TO15178 AL391358.1-201ENST00000605342 190 ntBASIC4.45□□□□□ -1.7
TO15178 AC010857.1-201ENST00000606398 594 ntBASIC4.45□□□□□ -1.7
TO15178 OR6R2P-201ENST00000609216 300 ntBASIC4.45□□□□□ -1.7
TO15178 AC004948.1-201ENST00000609858 672 ntBASIC4.45□□□□□ -1.7
TO15178 DUXAP10-204ENST00000612052 616 ntBASIC4.45□□□□□ -1.7
TO15178 AL050303.3-201ENST00000613704 284 ntBASIC4.45□□□□□ -1.7
TO15178 AC023509.5-201ENST00000617434 807 ntBASIC4.45□□□□□ -1.7
TO15178 AC012414.7-202ENST00000622705 1090 ntBASIC4.45□□□□□ -1.7
TO15178 ATE1-AS1-202ENST00000636460 506 ntBASIC4.45□□□□□ -1.7
TO15178 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 AC104446.1-201ENST00000613728 1321 ntBASIC4.45□□□□□ -1.7
TO15178 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TO15178 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.44□□□□□ -1.7
TO15178 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TO15178 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
TO15178 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TO15178 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.44□□□□□ -1.7
TO15178 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TO15178 AC046144.1-201ENST00000478559 1853 ntBASIC4.44□□□□□ -1.7
TO15178 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TO15178 OR10J6P-201ENST00000289731 930 ntBASIC4.44□□□□□ -1.7
TO15178 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TO15178 RNA5SP87-201ENST00000384155 118 ntBASIC4.44□□□□□ -1.7
TO15178 MTCO2P8-201ENST00000412213 658 ntBASIC4.44□□□□□ -1.7
TO15178 GTF2IP2-201ENST00000424290 697 ntBASIC4.44□□□□□ -1.7
TO15178 AL590762.4-201ENST00000425885 253 ntBASIC4.44□□□□□ -1.7
TO15178 RPS27P18-201ENST00000431701 247 ntBASIC4.44□□□□□ -1.7
TO15178 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.44□□□□□ -1.7
TO15178 MRPL48P1-201ENST00000445390 636 ntBASIC4.44□□□□□ -1.7
TO15178 OTX2P1-201ENST00000450956 354 ntBASIC4.44□□□□□ -1.7
TO15178 DNAJC19P8-201ENST00000452887 259 ntBASIC4.44□□□□□ -1.7
TO15178 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.44□□□□□ -1.7
TO15178 RPL6P9-201ENST00000466502 859 ntBASIC4.44□□□□□ -1.7
TO15178 AC104971.1-201ENST00000495117 578 ntBASIC4.44□□□□□ -1.7
TO15178 SCARNA22-201ENST00000503991 125 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms