Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC092013.1-201ENST00000438795 332 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 MTND2P24-201ENST00000453434 806 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC013267.1-201ENST00000458227 267 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 PABPC1P3-201ENST00000469174 459 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC126915.2-201ENST00000610957 190 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC093775.1-201ENST00000624154 1868 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AC011933.2-201ENST00000578539 2790 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AP003119.3-201ENST00000566747 4192 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 AP002907.1-201ENST00000606361 1430 ntBASIC6.93□□□□□ -1.3
TMEM88BA6NKF7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 RNU6-797P-201ENST00000363101 109 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 RNU6-289P-201ENST00000364093 107 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 Y_RNA.402-201ENST00000383972 102 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 MIR433-201ENST00000384837 93 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 SNORD115.1-201ENST00000391109 76 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC009480.2-201ENST00000422916 432 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AL133173.1-201ENST00000423458 397 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 CYCSP6-201ENST00000434498 302 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 MTND5P20-201ENST00000448677 143 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 GAPDHP17-201ENST00000449858 1001 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 VDAC2P4-201ENST00000452925 711 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC104563.1-201ENST00000476147 376 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC013356.1-201ENST00000489027 564 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 FAM92A1P2-202ENST00000504766 877 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AP001893.2-201ENST00000526949 202 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AL121594.2-201ENST00000541658 472 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC011840.5-201ENST00000582125 771 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 MAGOH2P-202ENST00000584384 429 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC104010.1-201ENST00000616889 150 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AL359880.1-201ENST00000621879 266 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AP002799.1-201ENST00000623552 423 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 U6.101-201ENST00000637707 76 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 HSPD1P8-201ENST00000400121 1658 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 CASC19-205ENST00000641013 1411 ntBASIC6.92□□□□□ -1.3
TMEM88BA6NKF7 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 AC007842.1-201ENST00000597336 2039 ntBASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.91□□□□□ -1.3
TMEM88BA6NKF7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms